Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0764 ATGAACCATGACCACTCATCCCCTCCTCCTCACGAGCTTCACCCACCCCAAGAAATCAACACCACCACCACCGCTCCTACCACCACTACCTGCGAAGCACCTGACATTCCCAACAGCAACAATAAAAGTCGCAAGTGCAAAGGCAAAGGTGGCCCTGACAACAGCAAGTTTAAGTATCGTGGGGTGAGGCAACGAAGCTGGGGCAAATGGGTCGCCGAGATCCGTGAGCCCCGTAAGCGAACCCGCAAGTGGCTCGGTACCTTTTCAACCGCCGAGGAAGCCGCTCGAGCCTACGACCGCGCCGCCATCATCCTCTACGGATCTAGGGCTCAGCTCAATCTACAACCCTCAGCCTCGTCTTCCCAATCCTCCTCCTCTCGTGGTTCTAACTCTTCTTCTTCTACTCAAACCCTTCGACCCTTACTTCCCCGTCCCTCTGGATTCGGCTTTACCTTTTCTTCCACAATTTCCTCTCATCCTGCGGTGTTCAACTCTACCGTCACTTCCGGGTTTCTACCCTACGGGGTTTGCCCTGGCGGTGGCAGTAATAATATCACGCCGGTGGTGTGCCCAATAAATAACACAGTACAACAACATCAGCATCGTCATCCCCAACAAGTGATGCAACCACAACAGCAATCATATCAATCCCTAGAATCTGATGGGAGCGTAGGAGGTGGAACTATTTATAACTCTAACAGAGCAAACTCGTACCAGAATTGCGATCATCCTCAGCAGCACACACAGCAGCATAATCTGTGGAATCAACAGCAGGATCAGAAATGCATGTACGATGATATGAGCTCGTTGGTGAGCTTGGATGGTTCAAGCTTATCTTCTTCGCAGACACAGACTATGGTTGCACCGGCAGCTCCGGATCCGCCGTTGGGGATGGAGGGGGCAGTTGGTCTGGGAACGTGGCCCTTTACAAATGACGAAGAGTATCCGCCAAATCTATGGGACTATAACGATCCTTTCTTGTTTGATTTTTAA 993 0.5136 MNHDHSSPPPHELHPPQEINTTTTAPTTTTCEAPDIPNSNNKSRKCKGKGGPDNSKFKYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEEAARAYDRAAIILYGSRAQLNLQPSASSSQSSSSRGSNSSSSTQTLRPLLPRPSGFGFTFSSTISSHPAVFNSTVTSGFLPYGVCPGGGSNNITPVVCPINNTVQQHQHRHPQQVMQPQQQSYQSLESDGSVGGGTIYNSNRANSYQNCDHPQQHTQQHNLWNQQQDQKCMYDDMSSLVSLDGSSLSSSQTQTMVAPAAPDPPLGMEGAVGLGTWPFTNDEEYPPNLWDYNDPFLFDF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0764 330 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Glsi08g0764 330 MobiDBLite consensus disorder prediction 116 141 - -
Glsi08g0764 330 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 30 276 - -
Glsi08g0764 330 Pfam AP2 domain 58 106 IPR001471 GO:0003700|GO:0006355
Glsi08g0764 330 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
Glsi08g0764 330 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Glsi08g0764 330 MobiDBLite consensus disorder prediction 46 60 - -
Glsi08g0764 330 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
Glsi08g0764 330 SUPERFAMILY DNA-binding domain 58 116 IPR016177 GO:0003677
Glsi08g0764 330 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Glsi08g0764 330 MobiDBLite consensus disorder prediction 16 45 - -
Glsi08g0764 330 FunFam Ethylene-responsive transcription factor 2 58 116 - -
Glsi08g0764 330 MobiDBLite consensus disorder prediction 1 60 - -
Glsi08g0764 330 CDD AP2 58 115 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0764 Glsi-ChrGlsi08 5870184 5871176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0764 44 330 AP2-EREBP Transcription Factor Family AT2G40220 44.551 1.49e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi08g0764 AP2 1.8e-13 CL0081