Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0763 ATGGCTGCAAGTAAGGCAAAAATTCAAGTTGTGAGACGTAACTATAAATCTCGTGTTAGCCCGGAGTTTCAAGTGCTCAGTTCACTCAGTAGTCGCGTGTCAGAGTACTCATTTAATGGTTTAACTTCGGAGTACTTTCATGCCATCTTAGCCGTCGCCGCTGCCGCCGCCCCTTCCTCAACCACCACCGCCGTCGTAGCTGTCTCTGTTACACTCTTAACCCCCATGTCTAGCCAAGATTCTCAGGCTTTCACTTGGCACTACACGGAGCTGGATGACCGGAACCTCGAAATCCGCGGCCGAACCTTCTTCTTCGTCGTCTTGCTCTTCTCCATTATACTTCTCGTTACCCTTCTCTTCCTGTACGCTCGCTGGATCTGGCGGTACCGGGGCCACCTTCCCAACACCTACAATTCTACCCAAGAGCGGTACGCGCCGCCCCCTCCGCCGCAGGGTCTCGATCCCGCTTCGATCAAGAAGTTGCCTATAATTTTGCATCAGACTCCATCGGGTTCCAAGTGTGCATTGGAGGAAACAGAGTGCTCTATTTGCCTCAGTGCGTTCAATGATGGTGAAAAATTGAAGGTCCTGCCCGGCTGTGACCATAATTTCCATTGTGAGTGTGTTGATAAGTGGCTGACCAATCACTCAAGTTGCCCTCTATGCAGAGCTTCTCTCAAGGTTGATTCTTCGTTTCCAAAGATTTTGATTCAAGAACCACCCATTCGAGCCAACCTTCCTTATAGCTCTCTCTTTTAGTTGGGTTGTCGCATTAATGGAAGAGGTACATCCAACCCGGCCTTTTCTCTATTAATTTCGGCGTTATTTTCTCGCACCTATAGAACAACTGAACCTGGTCATGTCATCAAGGTTTTGGATTGCTTTCATTCCTTCCGGACGATTCGGGTTCTGAGGCGAGGGAAGGTACGAGGTTCGGTTCCTGAGCATCATGAGAGCCAAGTGGAAGAAGAAGCGTATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCTAA 1023 0.4946 MAASKAKIQVVRRNYKSRVSPEFQVLSSLSSRVSEYSFNGLTSEYFHAILAVAAAAAPSSTTTAVVAVSVTLLTPMSSQDSQAFTWHYTELDDRNLEIRGRTFFFVVLLFSIILLVTLLFLYARWIWRYRGHLPNTYNSTQERYAPPPPPQGLDPASIKKLPIILHQTPSGSKCALEETECSICLSAFNDGEKLKVLPGCDHNFHCECVDKWLTNHSSCPLCRASLKVDSSFPKILIQEPPIRANLPYSSLFXLGCRINGRGTSNPAFSLLISALFSRTYRTTEPGHVIKVLDCFHSFRTIRVLRRGKVRGSVPEHHESQVEEEAYEEVEEEAPKDEAEI 340
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0763 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 229 IPR013083 -
Glsi08g0763 340 ProSiteProfiles Zinc finger RING-type profile. 181 223 IPR001841 -
Glsi08g0763 340 SUPERFAMILY RING/U-box 174 230 - -
Glsi08g0763 340 FunFam RING-H2 finger protein ATL66 145 228 - -
Glsi08g0763 340 SMART ring_2 181 222 IPR001841 -
Glsi08g0763 340 MobiDBLite consensus disorder prediction 314 340 - -
Glsi08g0763 340 Pfam Ring finger domain 180 223 IPR001841 -
Glsi08g0763 340 CDD RING-H2_EL5-like 180 223 - -
Glsi08g0763 340 MobiDBLite consensus disorder prediction 324 340 - -
Glsi08g0763 340 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 98 231 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi08g0763 Glsi-ChrGlsi08 5861835 5865971 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0763 77 231 C3H Transcription Factor Family AT3G11110 45.283 1.21e-37 130