Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0754 ATGGATTCCATTTTTTTGAGTTCGAACGTACGCACCGTCGACGAGATCTTTACGGACTACAGAGCTCGACGCAAGGCTCTACTTCGGGCCCTCACCTACGGTAACCATATCCCTTTCTCTCAAAAGCCCGAATTTTCCATTGCCAATGTACCTTTCCAGTTGAAATTTGACGCGTGGTTTTCTTCTTTGCTGTTTCAGACTTCGACAATCTCTATTCGCTTTGTAATCCGGGTAAAAAAAGAGGACCTGTGCTTGCACGGACACCCGGATGAGTCATGGGAGGTTACTCTACCCGCATATGAATTTCCACCAAAACATCCTCAGCCGACTGTGGGAATCAATATTGCTAGAAATTGGTTCGATCGTAAAGGCTGGCTTAAATGGGTTGCTGAGCACTGTGATAGCTGGTTGCTCTCTGTGGCATTTTACTTTGGGGTCCGACTTAATAGAAATGAGAGGGAGCGTCTATTAGGCCTGATAAATGATCTGCCCACTGTCCGTGAAGTTGTAACTAGAAGGAAGCATAAAAAAGACAAGCCCACTATTGATAGTGGTAGCAAATCCAGGAGCAGCTCAAAGAGATCAAATGATGATCAGATGGGCATCAGTTCTGAATTACTTGATGATAGTAATGGGGAGGATGACGAGGAGCATAGTAAAACACTTTGTGGGAGCTGTGGTGGAAATTACAAGTCCGATGACATATTTTCAAAGGCATTTTGGTTTCAGTTCTATGCCTCCTCCTTGAATTTGCTAGCTGCTTCTTTCCAACGAGGCTCCTCCCTCCAAGCCTTACAGACGAGACAATCCCAGGAAAAGAACTATGGAGTAATCCCAGGGTCTATAATCAGATATGAGAACTGGAAGGTGGATCGCCACCGTTTGTGGAAAGGAAAATTGCCATTCACTGTCGCTGACATCAATTCTCACTATTCAATACTTTATGTTATTGACTTGTTATAG 963 0.4424 MDSIFLSSNVRTVDEIFTDYRARRKALLRALTYGNHIPFSQKPEFSIANVPFQLKFDAWFSSLLFQTSTISIRFVIRVKKEDLCLHGHPDESWEVTLPAYEFPPKHPQPTVGINIARNWFDRKGWLKWVAEHCDSWLLSVAFYFGVRLNRNERERLLGLINDLPTVREVVTRRKHKKDKPTIDSGSKSRSSSKRSNDDQMGISSELLDDSNGEDDEEHSKTLCGSCGGNYKSDDIFSKAFWFQFYASSLNLLAASFQRGSSLQALQTRQSQEKNYGVIPGSIIRYENWKVDRHRLWKGKLPFTVADINSHYSILYVIDLL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0754 320 PANTHER CPG BINDING PROTEIN 9 236 IPR045104 GO:0006355|GO:0042393
Glsi08g0754 320 MobiDBLite consensus disorder prediction 171 215 - -
Glsi08g0754 320 Pfam Alfin 79 171 IPR021998 GO:0006355|GO:0042393
Glsi08g0754 320 MobiDBLite consensus disorder prediction 171 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0754 Glsi-ChrGlsi08 5789275 5793870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0754 7 242 Alfin-like Transcription Factor Family AT5G05610 46.835 2.58e-51 168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0754 08 5789275 5793870 Glsi07g2042 07 64622239 64625841 CCT
Glsi07g1972 07 63688119 63688457 Glsi08g0754 08 5789275 5793870 CCT