Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0752 ATGGCTGTCTCCGATGTCGGAGCTGTACTAGATTTCTTGAGGAAGAATGGCCTTACAGAGGCAGAGTCTGCTCTCAAAGAGGACATAATCGAAAAGGGTGATATGGGGTCGTTTGACTATGAGAAATTCTTTTTCCCAATGGTGCCGCCGCCGCCGCCGGTCAGAGTCCGATCTTTTTCCCACTGTTCGGAGGCGATGGGTGGTAGAGATTGCTCGAAATCAAGCTCTGAGTCGTCGGAGGATGAGTTCGTGAGCTTGGGGTCATCTACTTCCGATGTTTGTTCTTCGGAATTCATCAATCCATATGGAATCGGCTCATCATCTCAAACTCTCAATGATTCTGAATCTTCATCTGATAGATTATCTCAGTTTGGCACAGCACGTGATTATCATGAATTTGATATGCAAAATGAACCATATTGGTATAATGAGAAAGATGATGACTATTTCATGACTCCTAATTTTGAAGGGCCAGATCTCTTTGGCTGTCAAAGTGAGGATAAGTTCATTATGACATCAGAAACGGAGAATCAACATGAAAATCCTCTGAGTAATGATTGCAACTGTGAAGGATTTCAATTAGAGGGAAATGGTGATTATATGGACAAGCCATGCCTTTTTAATCATTCCTCTGAAGAAAATGAAAATGTGACTTATTCAAAAGACTACTGTCATATTGATAAAAAAGAACAACTTGAAGGAGGATTAGAGAGAAAGGTTGAGAATCATACTCTGGCCTATAGTTGTGAAGTACCATTATGCAAACGCTCTGGAAGTTCAGGAGAGTCTTGTAGTGGAGATCCTACAAACGAAAGATACCCTAGTTTGAAGGAAATTCATCTGAATGATTTTCATTTAAAGGTTGTTGGGGATAGTTCCTCTACTGATTCTGCTCCGGAGCATACTATGAACCAAACTTTTGACTACTTTGCTAACAATAACAACACTAAGGGGTACAAATCTCCCTATGACTTAACCATTAAAGTTGCTGAAACAGATCTACCAAATGGACTTGACATATATAAAGCTCGAGATTGTGTAGAATTCACTGAAGAATGCCAAGAACCTGAGATTGCTGCAGATGGGGAGGATATTACTGATGATGAGCTCTTAAAGTACATTCATGAGGATGAGTATGAAGTATTCGACCTGAGAATTATACATAGAAAGAACAGAACTGGATTTGAAGAAAGCAAGGATCTACCCATTGTGCTAAATACAGTAATAGCTGGCAGGTACTATGTAACAGAATATCTTGGTTCGGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAAACAGGAATAGATGTTTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGACCAAAGCTTAGATGAAATCAAACTTCTAAAGCTGGTCAATAAGCATGACCCAGCTGATGAATGCCACATATTGCGTCTTTATGACTACTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACTTATACGAATTTCAGAAATACAATCAAGAATCTGGTGGTGAAGCATATTTTACATTGAACAGGTTGCAGCTCATTACTCGTCAGTGTTTGGAGGCATTGCAATACTTGAACAGCTTGGGAATCATTCACTGTGACTTGAAGCCAGAAAATATTCTAATAAAAAGTTACAAAAGATGTGAGATAAAGGTTATTGATCTGGGAAGTAGTTGTTTTCAATCAGACAATCTGTGCCTATATGTACAATCACGATCCTATAGGGCTCCTGAAGTGATGTTAGGCCTCCAATATGATGAAAAGATTGACATATGGTCTCTTGGCTGTATCTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGATGCTGTTGCGATCATTCTGGCACGCATGATTGGAATGTTTGGTCCTATTGATCTGGAGATGTTAGTGAGAGGGCAGGAAACACAAAAGTACTTCACCAAAGAGTATGATCTTTATAATGTAAATGAGGAGACAAACCAACTGGAGTACATAATGCCGGAGGAGTGGTCATTGGAGGAGCACCTGCAGGTTACGGATACTATGTTTATCGACTTTGTCAGATACTTGCTTAGCACCAACCCCAGAAGACGACCAACTGCAAGACAGGCACTAAAGCATCCGTGGCTTTCCCATGTTTATAACTGCAAGTAG 2169 0.4016 MAVSDVGAVLDFLRKNGLTEAESALKEDIIEKGDMGSFDYEKFFFPMVPPPPPVRVRSFSHCSEAMGGRDCSKSSSESSEDEFVSLGSSTSDVCSSEFINPYGIGSSSQTLNDSESSSDRLSQFGTARDYHEFDMQNEPYWYNEKDDDYFMTPNFEGPDLFGCQSEDKFIMTSETENQHENPLSNDCNCEGFQLEGNGDYMDKPCLFNHSSEENENVTYSKDYCHIDKKEQLEGGLERKVENHTLAYSCEVPLCKRSGSSGESCSGDPTNERYPSLKEIHLNDFHLKVVGDSSSTDSAPEHTMNQTFDYFANNNNTKGYKSPYDLTIKVAETDLPNGLDIYKARDCVEFTEECQEPEIAADGEDITDDELLKYIHEDEYEVFDLRIIHRKNRTGFEESKDLPIVLNTVIAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADECHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTLNRLQLITRQCLEALQYLNSLGIIHCDLKPENILIKSYKRCEIKVIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVAIILARMIGMFGPIDLEMLVRGQETQKYFTKEYDLYNVNEETNQLEYIMPEEWSLEEHLQVTDTMFIDFVRYLLSTNPRRRPTARQALKHPWLSHVYNCK 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0752 722 CDD PKc_DYRK_like 413 715 - -
Glsi08g0752 722 SMART serkin_6 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0752 722 ProSiteProfiles Protein kinase domain profile. 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0752 722 PANTHER DUAL SPECIFICITY PROTEIN KINASE 152 716 - -
Glsi08g0752 722 SUPERFAMILY Protein kinase-like (PK-like) 402 719 IPR011009 -
Glsi08g0752 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Glsi08g0752 722 FunFam Putative serine/threonine-protein kinase dyrk2 407 494 - -
Glsi08g0752 722 Gene3D Phosphorylase Kinase; domain 1 408 494 - -
Glsi08g0752 722 Pfam Protein kinase domain 415 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0752 722 Gene3D Transferase(Phosphotransferase) domain 1 467 715 - -
Glsi08g0752 722 FunFam Serine/threonine-protein kinase ppk15 492 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0752 Glsi-ChrGlsi08 5770623 5774989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0752 410 710 MAP Kinase Gene Family AT5G19010 30.841 2.73e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Glsi08g0752 Pkinase 3.3e-50 CL0016