Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0750 ATGACCAAATTACCTTCCTACTTCGTCATCGTCTCTGTTAACGTTACTCTAGTCGTCGCCGCCCTAATAATCTTCACTGCAATTCCCTTCTCCCATGCTCTCGGCTCCGGAGCCACCCTCGCCATCAGCGACGGCTCCGCCACCGTCTGTGGCATCGTAGCAGGGGAACCGAAGCAGCGCATTGAATGTTACCGTCGGGGGCAGATCATCGCCGTCCCTCCGAACATTTCATTTTCGTCGATTTCCGGCGGAAGAAACTACTTCTGCGGCCTCAGGTCCGGTAACTATAGTTTGCTCTGCTGGGACACTGTGTCTTCCAATGACAGCTTTGCAAGGAAACGGCTTTATAACAATGATACTGTTCTATTAGAGAATCTGGCTATCGGGGATGGTCAAGTTTGCTCGACGGTAGTGGGTGCTGGGACGGTCGAATGCTGGAGAACCAATGGCACGTTTGAATTACCATCTGGGTCTTATCAATTCGTATCAATAACATCTGGGTCTGGCTTTTCTTGTGGAATTTTGAGGAACAGTTCTCAGATTCGGTGTTGGGGAAATATGCTCATTGCGAAGCAGATACAGAATGAATTTGCAAACATTTCCATGTGGAGTCTTGTAGCCGGCGATTCCCATGTTTGTGGATTGAATTCAACCGGCTTTTTGGTATGTAGAGGAAGTAATAGTTCTGGTCAACTGGATGCTCCTCAAGGTGGACCTCTGGAGTATACTGGGTTGGCACTCGGAGCTGAGCATAGCTGTGCAATTAGAAGATCTAACGGATCGGTTGTTTGTTGGGGTGGCAGGGGACTATTCTCGGTCAATGTTACAGAAGGAGTTTCTTTTGAGTTAGTTGTCTCTGGGTCGAATTTTACGTGTGGTGTGACAAGAAGCAATTTTTCAGTAATGTGTTGGGGGCCTGGGTGGCATAGTACTTCTGATTCTAGTTCAGGGTCTGAGCTTCTCTTGTCTCCTATTCTTCCGGGGCCTTGTGTTCAATCTTCTTGTAGTGAGTGCGGCATATATCCTGAATCTCAAAATCTATGCTCTGGCTTTGGTAACATTTGCAAGCCTTGTTGGCCTCAAATATCAATGCTGGCAGCACCACCGCCAGCCCTTTCTCCTCCATCCTCCCGATCAAAGACCATGACAAGGGGTTTACTGGCATTCGCCATTGTTGGATCCGTGGGAATTTTTGCTGGTATTTGCACAATAATTTATTGCTTGTGGACTGGGGTTTGTTTTGGTAACAAGAAAATCCATAGTTCTGTGCAGCCCACAATCACTAGATCAGGCAGTTCGAATGGGGTGACTGTTTCAAACAATGGCCCACCTTCGAGATCATCCACCATTAGGCGTCAGGGTTCAGGAATAATGAGGCGCCAGAGGAGTGGAACCTCATCCTCAAAACACCCAGACAGGACAGAGGAGTTCACCCTGGCTGAGCTGGTAGCAGCCACCAACAGTTTCTCAATTGAGAACAAGATTGGTTCTGGAAGCTTTGGTGTTCTCTACAGAGGCAAACTCGCTGATGGTCGTGAGGTGGCAATCAAAAGGGGTGAAACTGGTTCAAAGACGAAGATGTTTCAAGAGAAAGAAAGTGCCTTTGAGTCAGAATTGGCATTCTTGTCCCGTCTACACCACAAACATCTTGTTAGACTAGTTGGGTTTTGTGAAGAGAAGGATGAAATGCTCTTGGTGTATGAATACATGAAGAATGGAGCATTACATGACCATTTGCATGACAAGAACAACGTAGAAAAGAGTAGCAGTGTCTTGAATTCTTGGAAAATGAGGATCAAAGTTGCTCTAGATGCTTCTCGAGGAATCGAGTATCTACATAGTTATGCAGTTCCACCTATAATTCACAGAGATATCAAATCTTCTAACATTCTGCTTGATGCAAATTGGACGGCAAGAGTATCAGATTTCGGATTGTCATTAATGGGTTCAGACTCCGACCATGATTACAGGCCAATGAAGGCAGCAGGAACAGTTGGATACATTGATCCTGAGTATTATAGTCTGAACGTATTGACAGCAAAGAGTGATGTGTATGGGGTTGGAGTAGTACTGTTAGAACTTTTGACGGGAAAGAGAGCTATATTCAAGACTGGTGAAAATGGAGGTAGCCCTGTAAGCGTGGTGGACTTTGCAGTGCCTGCAATTTTGGCCGGAGAATTGGCCAAAGTTTTGGACCGGAGGGTTGGACCACCAGAGTTGAATGAAGCGGAGGCAGTGGAGCTGGTGGCCTACACTGCTATGCTTTGTGTGAATTTGGAAGGAAAAGATAGACCAACAATGGCTGACATTGTGGCGAATTTGGAGAGGGCTTTGGCTCTCTGCGATAGCAGTCATGGCAGCGTTTCCAGTGGTCCAATTTCTATTGGTTCAGAATGA 2397 0.4647 MTKLPSYFVIVSVNVTLVVAALIIFTAIPFSHALGSGATLAISDGSATVCGIVAGEPKQRIECYRRGQIIAVPPNISFSSISGGRNYFCGLRSGNYSLLCWDTVSSNDSFARKRLYNNDTVLLENLAIGDGQVCSTVVGAGTVECWRTNGTFELPSGSYQFVSITSGSGFSCGILRNSSQIRCWGNMLIAKQIQNEFANISMWSLVAGDSHVCGLNSTGFLVCRGSNSSGQLDAPQGGPLEYTGLALGAEHSCAIRRSNGSVVCWGGRGLFSVNVTEGVSFELVVSGSNFTCGVTRSNFSVMCWGPGWHSTSDSSSGSELLLSPILPGPCVQSSCSECGIYPESQNLCSGFGNICKPCWPQISMLAAPPPALSPPSSRSKTMTRGLLAFAIVGSVGIFAGICTIIYCLWTGVCFGNKKIHSSVQPTITRSGSSNGVTVSNNGPPSRSSTIRRQGSGIMRRQRSGTSSSKHPDRTEEFTLAELVAATNSFSIENKIGSGSFGVLYRGKLADGREVAIKRGETGSKTKMFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDEMLLVYEYMKNGALHDHLHDKNNVEKSSSVLNSWKMRIKVALDASRGIEYLHSYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMGSDSDHDYRPMKAAGTVGYIDPEYYSLNVLTAKSDVYGVGVVLLELLTGKRAIFKTGENGGSPVSVVDFAVPAILAGELAKVLDRRVGPPELNEAEAVELVAYTAMLCVNLEGKDRPTMADIVANLERALALCDSSHGSVSSGPISIGSE 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0750 798 CDD STKc_IRAK 495 776 - -
Glsi08g0750 798 Gene3D Transferase(Phosphotransferase) domain 1 570 786 - -
Glsi08g0750 798 FunFam Serine/threonine-protein kinase-like protein CCR4 570 790 - -
Glsi08g0750 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Glsi08g0750 798 MobiDBLite consensus disorder prediction 425 473 - -
Glsi08g0750 798 Pfam Protein kinase domain 490 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0750 798 SUPERFAMILY Protein kinase-like (PK-like) 466 774 IPR011009 -
Glsi08g0750 798 MobiDBLite consensus disorder prediction 425 464 - -
Glsi08g0750 798 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 199 784 IPR044815 GO:0004674
Glsi08g0750 798 SMART serkin_6 489 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0750 798 Gene3D - 192 339 IPR009091 -
Glsi08g0750 798 Gene3D Phosphorylase Kinase; domain 1 452 569 - -
Glsi08g0750 798 SUPERFAMILY RCC1/BLIP-II 69 307 IPR009091 -
Glsi08g0750 798 FunFam receptor-like protein kinase FERONIA 452 569 - -
Glsi08g0750 798 ProSiteProfiles Protein kinase domain profile. 489 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0750 798 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0750 Glsi-ChrGlsi08 5760867 5763263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0750 11 798 Receptor kinase-like Gene Family AT3G55950 59.780 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Glsi08g0750 Pkinase 2.2e-44 CL0016