Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0735 ATGGAAACTAGACATCAGGCAACTGAAGGCTTTTCTCCCAACCATTTGATAGGATCCGGTGGTTTTGGTTTTGTATATAAAGGAATTTTTGATACAGAGGAAAGAGTGTTAGCCATAAAGGTCCTCAACCTCCAGAAGAAAGGAGCTTCAAAGAGCTTCATGGCTGAATGCAATGCCTTAAGAAGTATCCAGCATCGAAACCTTGTGAAGATCTTAACATGTTGCTCTAGCACCGATTACAAAGGCAACGATTTCAAAGCTCTTACAAGACTTCTCCTTGCCAACAATCAGATTCGTCAAAACAAAACCAGCACAATTGGGTTAAAGGGCACCGTAGGGTGGGAACTGCCTGCTCTCTGGAGTATCCCAAAGAAAGGATTACAATGGAGATTGTCACCCGAGAACCTCACCTTATCAAGAATGAGTTTCTTGACGTTTGAAAGCAGGGAGGCGGAGCAAGTACACAGCAATTGCAGAGGCATTGCTAGCACAATGAAGCTTCCCAAAGCCTACTTTTATGCATTTTGCTCTATACACCTCCAAATAATTCTTCTATTCTCTTTGAACTTACTGTTGCTTCTGCCTGTCCCTAATGCTTGTGCTCCAACCAATGAGACCGACAGCTTGCATGGCCAAATTCCAGATGAAGTTGGCCATTTGTTTCGTCTGCAAGATCTTGACCTTACCAATAACACCTTTACAGGGGATATTCCAACCAGCTTGGCCAACTGCTCTGCGCTCGAACTCATTGACCTTACAAGCAATGAGTTCACAGGGACTATCCCCGTTCAGTTTGGCTCATTGGCAAATCTCGAAAAGCTTTATCTTAGTAAAAACAATCTGGCAGGAGGCTTATTACCATCCTTAGGTAATATTTCATCACTCAAATATTTTACAGTTGCATACAACAATCTGGAGGGAATTATTCCAGATAGCATAGGACGTTCCAAAAATTTAGTCCTGTTCTTGGTTGGCGCCAATAAACTGTCAGGCCTTGTCCCCTTTTCCTTTTACAATATATCATCACTCAATACCTTCTCGATCGCAGAAAACCAACTAGATGGCTCTTTACCAGAAAACATAGGCTACAACACACTCCCAAATCTCCAGGTACTTGAATTTGGGGGCAATCAACTTTCTGGGTCCATTCCAGTTTCATTATCCAATATTTCGAGTCTTCAAATCATTGATATCGATGGCAATAATTTTAGGGGACCAGTTCCCACCAACCTAGGAGACCTACAAGATCTTTGGTGGCTAAACTTAGGGCAAAATCGTCTTGGAAGTAACTCAATCAAAGACTTAGCTTTCTTAACTTCTCTAGTGAACTGCAGTAAATTGGAATACCTTGATCTGAGTGGAAATAATTTCGGAGGTGTTTTGCCCCAGACTGTTGGCAACCTCTCGGCCCATCTAAGTGAGCTGTATTTTGATTTCAATAAAATAAGTGGTAGCATCCCAACAGAGATTGGAAACCTGATCAACTTGGATATCCTAATTATGGAGAATAATCTCCTCACAGGCATCATTCCCACTTCTTTTGGTAAGTTCCAGAAGATGCAATTGATGTCTCTCAGTGTGAATAGATTATCTGACCAGATTCCATCCTCCATAGGAAATCTCACCATGCTGATTAATCTATCCTTACACAGTAATATGTTTGATGGGAGCATTCCTTCAAGTATGGAAAATTGCCGAAATTTGCTATACTTGGACTTGTCACAGAATAATCTCAGTGGTGCTATTCCCAGGCAGGTAATTGGAATATCTTCCTTATCACAGCTGCTTAACGTATCAGGAAACTCATTAAGCGGCAATCTACCGAGGCAAGTTGGCAGTCTGAGAAATGTCAACTCCCTAGATCTCTCAGAAAATGCTTTTTCAGCAAGACTTCTACTTGCCACCACCAATGAGGTTCGTCAAAATCAAACCAGCACAATTGGGTTAAAGGGCACTGTTGGGTACGCTGCTCCAGAATATGGAATGGGAGGCGAGGCATCAATGCAGGGTGACGTGTATAGCTTTGGGATCACGGTGTTGGAGATGTTCACGGGGAAAAGACCCACCCACGAAATGTTCACAGATGGCTTCAACCTTCATAATTATGTCAAACTCGCGTTACCCCAAAACCTTGTTGATGTTGTCGACCCAATCCTTCTCCAGAGAGATGCAGGAGAGACATCAGAAGATAACAGTGACAATTCTCAGGGAGAAGAAATCAAGGTGGAAAATGGAAACACCAATGTGAAGATGGATGCTAAAATGCAAGAGTGTTTGATATCAGTTTTACGGGTGGGACTTGCCTGCTCGATGGAGTCTCCCAAAGAAAGGATTACCGTGGAGGATGTAGCCCGAGCACTGCATCTTTTAAAAAATAAGCATAACAGCCGAGAAATGCCAGGGAATCGCGAATTCAGTACGGCTAAGACAGTGGGTTCACTTTTGCTTCGTTCTTGTGAGTTGTAA 2466 0.4266 METRHQATEGFSPNHLIGSGGFGFVYKGIFDTEERVLAIKVLNLQKKGASKSFMAECNALRSIQHRNLVKILTCCSSTDYKGNDFKALTRLLLANNQIRQNKTSTIGLKGTVGWELPALWSIPKKGLQWRLSPENLTLSRMSFLTFESREAEQVHSNCRGIASTMKLPKAYFYAFCSIHLQIILLFSLNLLLLLPVPNACAPTNETDSLHGQIPDEVGHLFRLQDLDLTNNTFTGDIPTSLANCSALELIDLTSNEFTGTIPVQFGSLANLEKLYLSKNNLAGGLLPSLGNISSLKYFTVAYNNLEGIIPDSIGRSKNLVLFLVGANKLSGLVPFSFYNISSLNTFSIAENQLDGSLPENIGYNTLPNLQVLEFGGNQLSGSIPVSLSNISSLQIIDIDGNNFRGPVPTNLGDLQDLWWLNLGQNRLGSNSIKDLAFLTSLVNCSKLEYLDLSGNNFGGVLPQTVGNLSAHLSELYFDFNKISGSIPTEIGNLINLDILIMENNLLTGIIPTSFGKFQKMQLMSLSVNRLSDQIPSSIGNLTMLINLSLHSNMFDGSIPSSMENCRNLLYLDLSQNNLSGAIPRQVIGISSLSQLLNVSGNSLSGNLPRQVGSLRNVNSLDLSENAFSARLLLATTNEVRQNQTSTIGLKGTVGYAAPEYGMGGEASMQGDVYSFGITVLEMFTGKRPTHEMFTDGFNLHNYVKLALPQNLVDVVDPILLQRDAGETSEDNSDNSQGEEIKVENGNTNVKMDAKMQECLISVLRVGLACSMESPKERITVEDVARALHLLKNKHNSREMPGNREFSTAKTVGSLLLRSCEL 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0735 821 SUPERFAMILY L domain-like 208 427 - -
Glsi08g0735 821 Gene3D Ribonuclease Inhibitor 360 431 IPR032675 -
Glsi08g0735 821 SUPERFAMILY Protein kinase-like (PK-like) 5 79 IPR011009 -
Glsi08g0735 821 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 442 641 - -
Glsi08g0735 821 Gene3D Ribonuclease Inhibitor 179 265 IPR032675 -
Glsi08g0735 821 PANTHER OS04G0122200 PROTEIN 638 785 - -
Glsi08g0735 821 Gene3D Ribonuclease Inhibitor 266 359 IPR032675 -
Glsi08g0735 821 Gene3D Ribonuclease Inhibitor 432 632 IPR032675 -
Glsi08g0735 821 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 203 441 - -
Glsi08g0735 821 Pfam Leucine Rich Repeat 446 468 IPR001611 GO:0005515
Glsi08g0735 821 ProSiteProfiles Protein kinase domain profile. 447 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0735 821 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Glsi08g0735 821 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Glsi08g0735 821 SUPERFAMILY Protein kinase-like (PK-like) 645 789 IPR011009 -
Glsi08g0735 821 Pfam Protein kinase domain 14 79 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0735 821 Gene3D Transferase(Phosphotransferase) domain 1 633 795 - -
Glsi08g0735 821 SUPERFAMILY L domain-like 365 627 - -
Glsi08g0735 821 Pfam Protein tyrosine and serine/threonine kinase 638 694 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0735 Glsi-ChrGlsi08 5678046 5686934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0735 2 89 Receptor kinase-like Gene Family AT5G20480 57.955 5.13e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi08g0735 PK_Tyr_Ser-Thr 2e-06 CL0016