Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0720 ATGGACGAGGGCATGTCAGGGTTTTGTATTAGAGGTGGGAGTAGTGGTGGTACCAAGTGTGGCCGTTGGAATCCCACTGCCGAACAGGTTAAGCTCCTGACTGAACTCTTCAGGTCCGGACTCCGCACCCCAAGCACTGATCAGATTCAAAAGATCTCCACCCAGCTCAGCTTTTACGGTAAGATTGAGAGCAAGAATGTGTTTTATTGGTTTCAGAACCATAAAGCTAGGGAAAGACAGAAACGTCGCAAAGTCTCTTTTGATGATATTGACAAGCATATCAATATTCGTAGAGAAAACTCTGCAATTTCTTCGACATACAGGAAGAATCAGGTTTCAGAGACTGAGAGAGTGGTGGAGACACTCCAACTCTTCCCCTTGAACTCGTTTGGTGAACTAGAAACAGAGAAGGTGAGGGGGCATGCAAATTGCAGGAAGGCAGAACAAATGGAAGACCCACCACTGGATCTGCGCTTAAGCTTTCTGTGA 489 0.4642 MDEGMSGFCIRGGSSGGTKCGRWNPTAEQVKLLTELFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDIDKHINIRRENSAISSTYRKNQVSETERVVETLQLFPLNSFGELETEKVRGHANCRKAEQMEDPPLDLRLSFL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0720 162 SUPERFAMILY Homeodomain-like 13 84 IPR009057 -
Glsi08g0720 162 ProSiteProfiles 'Homeobox' domain profile. 16 81 IPR001356 GO:0003677
Glsi08g0720 162 Pfam Homeodomain 20 80 IPR001356 GO:0003677
Glsi08g0720 162 CDD homeodomain 22 82 IPR001356 GO:0003677
Glsi08g0720 162 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 14 101 IPR044555 GO:0003700|GO:0099402
Glsi08g0720 162 SMART HOX_1 18 85 IPR001356 GO:0003677
Glsi08g0720 162 FunFam WUSCHEL-related homeobox 11 19 87 - -
Glsi08g0720 162 Gene3D - 19 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0720 Glsi-ChrGlsi08 5598484 5599118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0720 1 162 Wox Gene Family AT3G11260 54.301 4.54e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi08g0720 Homeodomain 4.4e-18 CL0123