Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0718 ATGCCTTCTTCTACACCCACTCTACTCTCCAAATGCACTGTCTGCCCTGACCAGAAGTCCACTTTTGGAGACCTCAAGCTTTCTGTCTCCGACCTTCCCATGCTCTCCTGCCACTATATCCAGAAGGGTTGCCTTTTCACTCTCCCTTCTCTCCCTTCCCACTCCCTCATCCCTCTTCTTAAGTCCGCTCTCTCTCGCACTCTTTCCCTTTTCCCCCCTCTCGCTGGCCGCTTGAAGACCAATTCTGATGGCTACGTCTACATCACCTGTAACGACGCTGGTGTTGATTTCTTCCACGTCACTGCCCCCGGATTCTTCGTCCGCGACCTGTTGGCCCCACCCGATGTCCCTGAATCCTTCAAGGAATTCTTCGCCTTTGACAGGAAAGTCAGTTACACTGGTCATTTCAGCCCGATTATGGCCGTTCAATTCACTGAGCTTGCAGACGGCGTCTTCATCGGCTGTGCCGTCAACCACGCCGTTACAGACGGTACCTCCTTCTGGAATTTCTTCAATACCTTCGCCGAAGTCTTTAGAGGAGCCAAGAAGATTTCCAAGGTACCCGACTTCCGCCGGGAGTCTGTTCTTATATCCAAAGCCGTGCTCCGGTTGCCGGAAGGCGGGCCTAAGGTCACGTTCAACGCAGACGAGCCATTGCGCGAGAGAATTTTCAGCTTCGGCCGCGAAGCAATTCAGAAGCTGAAAGCCAGAACAAACAATCGGAAATGGATAGCTAACGGGGATGTTAACGCCGTGGAATTAATGGGGAAGCAAAGCAACGATCCTTACCAGAAGAAAAACGGTAAGGTTACATCGATAATCGAGAATTGGCTCAAGAGTGCCGTTTCGAAACCACAGGTTGTCGAAACTTCTGAGATATCCTCGTTTCAGTCGCTGTGCGCACTTGTGTGGCGTGCAGTGACCCGTGCCAGGAAGTTGCCCCCGTCAAAAACGACGACGTTCAGAATGGCAGTGAATTGTCGTCCCAGGCTAGCGCCAAAACTGGACCCATACTACTTCGGCAATGCGATTCAGAGCATACCCACTTATGCCCCAGCTGGGGACGTACTGTCACGGGATCTGCGCTGGTGCGCGGAGCAGCTGAACAAGAACGTGAAGGCTCACGATGACGCTACGGTGCGACTGTTCGTAGAGGACTGGGAAAGTAACCCAAGGTGCTTCCCGCTAGGGAATTTCGACGGTGCATCAATCACGATGGGTAGCTCGCCGAGATTCCCAATGTACGAGAATGATTTCGGGTGGGGGAGACCCTTGGCAGTTCGGAGTGGCCGGGCAAATAAATTTGACGGTAAGTTCTCGGCATTTCCTGGGAGAGAAGGGAGTGGGAGCGTTGATTTGGAGGTGGTTTTGGCGCCGGAAACGATGGCCGGGTTGGAGTCGGACTCCGAGTTCATGTTATACGCATCATCGTTTCAGTTATGA 1443 0.5288 MPSSTPTLLSKCTVCPDQKSTFGDLKLSVSDLPMLSCHYIQKGCLFTLPSLPSHSLIPLLKSALSRTLSLFPPLAGRLKTNSDGYVYITCNDAGVDFFHVTAPGFFVRDLLAPPDVPESFKEFFAFDRKVSYTGHFSPIMAVQFTELADGVFIGCAVNHAVTDGTSFWNFFNTFAEVFRGAKKISKVPDFRRESVLISKAVLRLPEGGPKVTFNADEPLRERIFSFGREAIQKLKARTNNRKWIANGDVNAVELMGKQSNDPYQKKNGKVTSIIENWLKSAVSKPQVVETSEISSFQSLCALVWRAVTRARKLPPSKTTTFRMAVNCRPRLAPKLDPYYFGNAIQSIPTYAPAGDVLSRDLRWCAEQLNKNVKAHDDATVRLFVEDWESNPRCFPLGNFDGASITMGSSPRFPMYENDFGWGRPLAVRSGRANKFDGKFSAFPGREGSGSVDLEVVLAPETMAGLESDSEFMLYASSFQL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0718 480 Gene3D - 7 204 IPR023213 -
Glsi08g0718 480 Gene3D - 206 467 IPR023213 -
Glsi08g0718 480 Pfam Transferase family 8 472 - -
Glsi08g0718 480 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0718 Glsi-ChrGlsi08 5585203 5586645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0718 59 466 Monolignol Biosynthesis Gene Families AT5G48930 26.606 1.35e-32 127