Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0714 ATGTCCGACGCTTTGATCAATGGGCTCGCGGGAGCCGGAGGGGGGATCATTGCTCAGCTCATCACATATCCTCTCCAAACTGTAAACACTCGTCAACAAACCGAGCGTGATCCGAAGAAACACAAGAGGAATCTAGGAACTCTTCAGCAAATGTGCCAGGTTATAAAACACGAGGGGTGGGAGCGGTTGTATGGAGGATTGACGCCATCGCTTGTGGGTACAGCTGCGTCTCAGGGTGTTTATTATTACTTCTATCAAGTATTCAGGAACAAGGCTGAAGCAGCTGCACTAGAACAGAAAAACATAGGCATTGGTGATGGATCAGTTGGGATGTTATCTTCACTTCTTGTTGCTGCTTTATCTGGGTGTGTTAATGTGCTCTTGACAAATCCCATATGGGTAGTTGTTACACGCATGCAGACTCATAGAAAAGATTCAAAAAGAACTCTGTCTGGTCATGGGCTGTCTGTTGCCTCCGAACAAACAACTCTTTCTGCAGTTGAACCTCCTCCTTATGGAACTAGCCATGTGATTCAAGAAGTCTACGGTGAAGCTGGGGTTTGGGGTTTCTGGAAAGGCGTTTTACCAACATTGATCATGGTAAGCAATCCTTCTATACAGTTCATGCTGTATGAAGCCATGTTGTCAAGGTTAAAGAAAAGACGTGCTTTGAGTAAGAAGGGTAGCAATGGGGTTACTGCTTTAGAGATATTTGTTCTTGGAGCTCTGGCTAAGCTTGGAGCAACTGTTGTAACTTATCCTCTTCTAGTAGTGAAGGCAAGGCTTCAAGCAAGACAGGTTACAACTGGAGACAAGAGGCACCATTATAAAGGCACATGGGATGCTATTGTTAAGATGATCCGCTATGAAGGGTTTTATGGATTTTACAAAGGTATGAGGACTAAAATTGTACAAAGTGTGCTGGCTGCTGCTGTTTTATTCATGGTAAAGGAAGAGCTAGTTAAGGGCACTCGTTTCTTGCTTGCTAAGGATGCCACTAACGTTGCAAAGTCGAAGCCTCTATGA 1026 0.4444 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTERDPKKHKRNLGTLQQMCQVIKHEGWERLYGGLTPSLVGTAASQGVYYYFYQVFRNKAEAAALEQKNIGIGDGSVGMLSSLLVAALSGCVNVLLTNPIWVVVTRMQTHRKDSKRTLSGHGLSVASEQTTLSAVEPPPYGTSHVIQEVYGEAGVWGFWKGVLPTLIMVSNPSIQFMLYEAMLSRLKKRRALSKKGSNGVTALEIFVLGALAKLGATVVTYPLLVVKARLQARQVTTGDKRHHYKGTWDAIVKMIRYEGFYGFYKGMRTKIVQSVLAAAVLFMVKEELVKGTRFLLAKDATNVAKSKPL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0714 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 323 IPR018108 -
Glsi08g0714 341 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Glsi08g0714 341 Pfam Mitochondrial carrier protein 234 321 IPR018108 -
Glsi08g0714 341 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Glsi08g0714 341 SUPERFAMILY Mitochondrial carrier 3 319 IPR023395 -
Glsi08g0714 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 325 IPR044712 GO:0006862|GO:0055085
Glsi08g0714 341 Gene3D Mitochondrial carrier domain 7 326 IPR023395 -
Glsi08g0714 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Glsi08g0714 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0714 Glsi-ChrGlsi08 5555609 5563484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0714 24 328 Chloroplast and Mitochondria Gene Families AT2G47490 28.939 9.66e-30 114