Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0680 ATGGCACGGACACTGTGTTCGCGTTCATGGCTTCTCATTCTCACCCTTACAGTCACAGCCATGCTGCTGACTGCCCATGCTGATTCTCAAGATAATGAAAAGACTTATATTGTGTACATGGGTAACTATCCAAGTGGAGATATCCCCAAGTCAATGCTTCACATGAGCATGCTCCAAAAAGCCCTTGGCAGCAATAGGGCAGTAGATGCACTACTTCATAGCTTCAAGAGAAGTATCAATGGGTTTGTTGTGAATCTTAAAGAGGAGGAAGTGCAAAAAGTTGCTGCAATGGAAGGTGTGGTTTCTGTGTTCCTAAATGGAAAGAAACAATTACACACCACAAGGTCATGGGACTTCATAGGCTTTCCTCAACAAGCGAAAAGAGCTACAACAGAAAGCGATATAGTTATAGGGGTGCTTGACACTGGAATCTGGCCACACTCCAGCAGCTTCAATGATTCAGGATTTGGTCCTCCACCCACTAAATGGAAGGGAGCCTGCTACAATATCACCTGCAACAACAAAATCATTGGAGCTAAATATTATCGCAGTGACAGGCTATTTGGTGAAGATGATATCATATCTCCAATAGATTCAAATGGGCATGGGACACACACTGCATCAACAGCTGCTGGGGGCTCAGTTAGCTCAGCAAGCTTTTATGGTCTTGGCTTAGGGACAGCAAGAGGCGGGGTTCCATCAGCAAGAATTGCAGTGTATAAAGTTTGCTGGTCTGATGGATGCCATGATGCTGACATTCTTGCTGCATTTGATGATGCAATAGCAGATGGGGTTGACATTATTTCGCTCTCAGTTGGAAATCAAGCAGCTAATCAATATTTTTATGATTCAATTGCTATTGGAGCTTTTCATGCTATGAGAAATGGAATATTGACCTCGAATTCTGCTGGGAACAGTGGTCCAAATCTTGCAACAGTCACTAATTTTTCACCTTGGTCTCTTTCTGTGGCTGCCACCTCCATTGACAGAAAATTCTTCACCAAGGTTCAGCTGGGGAACAAGCTGATTTATGAGGGAGTTTCAGTAAATAGCTTCAACTTGGGTAGTAATCTTTATCCTATAATTTATGGTGGGGATGTACCAAACATCCTCAAAGGCTACAATAGCTCCATATCCAGGCTTTGCTTCGAAAATTCACTGGACCAGAATTTGGTGAAGGGAAAAATTGTTCTTTGTGATGGCAGTTTTGGTGCTAAGAAAGTAGGGTTTGCATCTGGTGCAGCTGGAATTGTAATGCACAGCGAAGGAATTAAAGATGCAGGTTACACTTTTGCTTTGCCTGCTTCTCACATTAACACACAGGATGCTAATAGCATATACGCCTACATGACTACCACAAGAGCTATTAAGAAAACGTTTGAGGTGTGGTTTAATTTATTATCTGATGATTTGCGCGAAATGATGTGA 1428 0.4251 MARTLCSRSWLLILTLTVTAMLLTAHADSQDNEKTYIVYMGNYPSGDIPKSMLHMSMLQKALGSNRAVDALLHSFKRSINGFVVNLKEEEVQKVAAMEGVVSVFLNGKKQLHTTRSWDFIGFPQQAKRATTESDIVIGVLDTGIWPHSSSFNDSGFGPPPTKWKGACYNITCNNKIIGAKYYRSDRLFGEDDIISPIDSNGHGTHTASTAAGGSVSSASFYGLGLGTARGGVPSARIAVYKVCWSDGCHDADILAAFDDAIADGVDIISLSVGNQAANQYFYDSIAIGAFHAMRNGILTSNSAGNSGPNLATVTNFSPWSLSVAATSIDRKFFTKVQLGNKLIYEGVSVNSFNLGSNLYPIIYGGDVPNILKGYNSSISRLCFENSLDQNLVKGKIVLCDGSFGAKKVGFASGAAGIVMHSEGIKDAGYTFALPASHINTQDANSIYAYMTTTRAIKKTFEVWFNLLSDDLREMM 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0680 475 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 137 147 IPR023827 -
Glsi08g0680 475 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 455 IPR045051 -
Glsi08g0680 475 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 112 IPR037045 -
Glsi08g0680 475 Pfam Subtilase family 133 342 IPR000209 GO:0006508|GO:0008236
Glsi08g0680 475 Pfam Peptidase inhibitor I9 35 111 IPR010259 -
Glsi08g0680 475 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Glsi08g0680 475 PRINTS Subtilisin serine protease family (S8) signature 198 211 IPR015500 -
Glsi08g0680 475 CDD Peptidases_S8_3 109 328 IPR034197 -
Glsi08g0680 475 CDD PA_subtilisin_like 336 454 - -
Glsi08g0680 475 SUPERFAMILY Subtilisin-like 111 357 IPR036852 GO:0004252|GO:0006508
Glsi08g0680 475 ProSiteProfiles Serine proteases, subtilase domain profile. 116 475 - -
Glsi08g0680 475 Gene3D - 329 459 - -
Glsi08g0680 475 Gene3D Peptidase S8/S53 domain 134 328 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0680 Glsi-ChrGlsi08 5366236 5369884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0680 40 454 Subtilisin-like Serine Gene Family AT5G59190 47.971 2.13e-132 397