Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0675 ATGAAATGGTTTAGTAAGCTTTTCAAAAGGGGGTCCAGTCGAGGAAGGAGAGGTCGTCGCCCGCAGCAGCCTGAGGAAAACATGGTTTGGCGCTCACCAGATAGACCTTTGGATGACGGTGCTGGAGCTCAGAAAGAGAAAGAGGATCTGGACCATGCAATTGCACTGTCTTTAGGCGAAGATCTAAAGAGACCAAATGCTCATCAAAAATATAGATGGCGAACAGACGCTGATGAAGACTATGCAAAGGCACTACAGGATAGCCTCAACTCAGCTGCACATCCTCCATATGCCCCCACGCCATTTTATCCTAGGGGACATAGGATATGTGGTGGCTGCAACCAGGACATAATCTACGGCAATTGTTTGGAATGCATGGGTACTTACTTTCATCCAGACTGCTTTTGCTGTCACTCTTGTCGTCACCCCATTACTGAGCGTGAGTTTTCTTTATCAGGGAGGCATCCATATCACAAATCCTGTTTTAAAGAGTTAAACCACCCAAAATGTGAAGTTTGCCACCAGTTTATTCCTATAAACGCGGCTGGTTTGATCGAGTATAGGTGCCACCCCTTTTGGTCCCAAAAGTATTGCCCATCTCATGAATATGATAACACAGCTCGCTGCTGTAGTTGCGAAAGATTGGAGTCTTGGAATTCAAAATACTATAGTTTGGAAGATGGACGGAGTTTGTGCTTAGAGTGCATGGAATCGGCTATAACGGATACTGGAGATTGTCAGCCTCTTTACCATGCTATCAGAGATTACTATGAAGGAATGAATATGAGAATAGATCAGCAAATTCCCATGCTTCTAGTTGAGAGAGAAGCACTCAATGAAGCTATAGTGGGAGAGAAGAATGGTTTCCATCACTTGCCAGAGACAAGAGGCTTATGCCTATCAGAAGAGCAGACTGTGACCAGTATACATAGAAGAAGGCCAAGAATTGGAGGCCATCGACTAATAGGGATGAGAACTCAGCCTCAAAAGCTGACTAGAAAATGTGAAGTTACTGCCATTCTTGTTATCTATGGTCTTCCCAGGTTACTAACAGGTGCTATTCTTGCCCACGAGTTGATGCACGCCTGGTTGCGCCTGAAAGGTTACCGCAACCTTAAACCTGAAGTAGAGGAAGGTATCTGTCAAGTTCTCTCTCATATGTGGCTTGAGTCGGAAGTGATGCCAGGCCCATCAACATCAGCAGCTTCTTCTTCCTCCTCCTCCTCCTCGTCAAAGAAAGGTGCAAAATCACAAGTTGAAAATAAGCTGGGTGAATTTTTCATTAACCAGATAGTGAATGATTCTTCTCCAGCTTATGGCGGTGGTTTTAGAGCTGCTAATGAAGCTGTCAATAAATATGGTTTGCGTTGTACCCTCGACCATATTCAGTTGACTGGTAATTTCCCACTATAA 1413 0.4452 MKWFSKLFKRGSSRGRRGRRPQQPEENMVWRSPDRPLDDGAGAQKEKEDLDHAIALSLGEDLKRPNAHQKYRWRTDADEDYAKALQDSLNSAAHPPYAPTPFYPRGHRICGGCNQDIIYGNCLECMGTYFHPDCFCCHSCRHPITEREFSLSGRHPYHKSCFKELNHPKCEVCHQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTARCCSCERLESWNSKYYSLEDGRSLCLECMESAITDTGDCQPLYHAIRDYYEGMNMRIDQQIPMLLVEREALNEAIVGEKNGFHHLPETRGLCLSEEQTVTSIHRRRPRIGGHRLIGMRTQPQKLTRKCEVTAILVIYGLPRLLTGAILAHELMHAWLRLKGYRNLKPEVEEGICQVLSHMWLESEVMPGPSTSAASSSSSSSSSKKGAKSQVENKLGEFFINQIVNDSSPAYGGGFRAANEAVNKYGLRCTLDHIQLTGNFPL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0675 470 PANTHER PROTEIN DA1-RELATED 2 3 469 IPR045218 -
Glsi08g0675 470 FunFam Protein DA1-related 2 98 163 - -
Glsi08g0675 470 ProSitePatterns LIM zinc-binding domain signature. 110 144 IPR001781 -
Glsi08g0675 470 Pfam Protein DA1 259 464 IPR022087 -
Glsi08g0675 470 MobiDBLite consensus disorder prediction 396 415 - -
Glsi08g0675 470 CDD LIM_DA1 110 162 - -
Glsi08g0675 470 SMART lim_4 109 161 IPR001781 -
Glsi08g0675 470 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 102 135 - -
Glsi08g0675 470 MobiDBLite consensus disorder prediction 395 415 - -
Glsi08g0675 470 MobiDBLite consensus disorder prediction 1 48 - -
Glsi08g0675 470 Gene3D Cysteine Rich Protein 105 167 - -
Glsi08g0675 470 Pfam LIM domain 110 163 IPR001781 -
Glsi08g0675 470 ProSiteProfiles LIM domain profile. 108 168 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0675 Glsi-ChrGlsi08 5320157 5322989 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi08g0675 DA1-like 1.2e-97 CL0126