Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0651 ATGGCAAAAGCACTCCTACTTCTCTTGTTTTTCTTTCTGGCCTCAAATCCAGTAAAATCTCAGCATGACGAGCTGTTCTTTAACGGGTTTGATGGCGCTGGCAGCAACGTAAGTTTAAACGGAGGTGCAGAGATTGGGATCAATGGCATAATTTGCTTAACAAACGACTCGCTTAGAGTACTTGGGCATGCGTTTTACTCATCACCTATCCGGTTCAAGAAGACCACCGACGGCAAAGTTTCCTCCTTTTCCACCGCTTTCGCTTTTGCAATAATTCCCCAGTACCCAAAATTGGGTGGCCATGGCTTCGCTTTCACCATTTCTCGCTCGAAAGAGCTTGCTGGTGCGTATCCTAGCCAGTACCTGGGCCTTCTCAATCCAAACGATGTTGGGAATTTCTCAAACCATTTATTCGCTGTGGAGTTTGACACTGTTCAGGACTTCGAATTCGGTGACATCAATGATAACCATGTGGGTATCGACCTGAATAGCTTGATATCGAACAAATCGGTTCAAGCTGCGTACTTCACCCATGGGTCAACCAAGCAAGACCTCAATTTGAAGAGTGGTAAGGTCATTCAGGCATGGGTTGACTATAATTCCTCCAGGAATCAATTGGAAGTTAGACTTTCCCCTACTTCTGCAAAACCCAGTTCCCCAATTTTGTCTTATAGAGTGAATCTCGCTCAATTTTTTGAAGACTTTATGTATGTGGGGTTTTCTTCTTCAACTGGGTTGCTTGCGAGCTGGCACTACATCCTGGGTTGGAGCTTCAAGATGGATGGAGAGGCAAAGTCTCTGAATTTAGAATCATTGCCTTCACTTCCAGGACCTAAAAAGAGTCAAACAGCCTTAATCGTGGGAGCCTCTCTATCTGCTGCTTTTCTAATAACTGGGGCAATTGGGGTGGCATTTTATCTTGTTAGAAAGAAGAAGTATGCTGATGTTATTGAAGCGTGGGAGCTCGATGTTGGTCCCCACAGATTCCCATACCGGGAGCTCAAGCAAGCAACAAAGGGCTTCAAAGACAAACAACTACTTGGGTTTGGTGGGTTTGGTCGAGTCTATAAAGGAGTTCTGCCAATTTCAAATACCCAAGTCGCTGTAAAGCGAATTAACAATGAATCAAAACAAGGTTTGACAGAATTTGTGTGTGAGATAGCTACCGTTGGTCGGCTTCGTCATAGAAATCTGGTTCAATTACTGGGTTGGTGTCGAAGGCGTGGTGATCTATTACTTGTATATGATTTTATGCCCCACGGGAGCTTGGACAAGTACCTCTTTGATGAAACTAAAGCAATTTTGAGCTGGGAACAGAGATTTAAGATCATAAAGGGCGTAGCTTCAGGTCTTCTATATTTGCACGAGGAATGGGAACAAACTGTGATTCATAGGGACATAAAAGCTGCGAATGTTCTATTGGATTCAGACATGAATGGGAGGCTTGGGGACTTTGGCTTAGCTAAGCAGTATGAGCATGGGTCAAATCCAAGCACGACCCGAGTAGTGGGCACGCTGGGTTACTTGGCACCAGAGCTCACACGTACGGGGAAACCCACAACAAGCTCGGACGTTTTTGCATTCGGTGCTCTATTACTAGAAGTGGCATGCGGGAGAAGACCCGTTGAATCTAAAGCGTTACCGGAGGAGCTCATATTGGTGGACTGGGTTTGGGATCGGTGGCAGGTCGGTGCAATATTGGACGTAATAGACCCTAAATTGGGTGGTGAATTTGATGAGCTACAGGCTGTGGTGCTGCTCAAACTGGGTTTAATGTGTTCAAATAATTCGCCGGAAGCTCGACCCAGTATGAGACAGGTAGTAAGGTACTTGGAGGGTGAGGCGGTGCTGCCTGAGGTGGTGCCGGCACCTGATGCATTGGATGTAAAAAAGGGAGAAGGAGCTGCTGGCGGTGGCGACGGTGAATTTGAGGATTTCGTGCATTCATATCCAATGTCATCGTATTTTGACAGGGCGAGTACGTGGTCATTGGCCGGCGATGACAGGGACGTTGATGTTGAGGCTGGCCCTGCTTCGCCTCTCTCTCTTTCCAGTAGACGGGAGGGTAGGTAG 2073 0.4665 MAKALLLLLFFFLASNPVKSQHDELFFNGFDGAGSNVSLNGGAEIGINGIICLTNDSLRVLGHAFYSSPIRFKKTTDGKVSSFSTAFAFAIIPQYPKLGGHGFAFTISRSKELAGAYPSQYLGLLNPNDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDLNSLISNKSVQAAYFTHGSTKQDLNLKSGKVIQAWVDYNSSRNQLEVRLSPTSAKPSSPILSYRVNLAQFFEDFMYVGFSSSTGLLASWHYILGWSFKMDGEAKSLNLESLPSLPGPKKSQTALIVGASLSAAFLITGAIGVAFYLVRKKKYADVIEAWELDVGPHRFPYRELKQATKGFKDKQLLGFGGFGRVYKGVLPISNTQVAVKRINNESKQGLTEFVCEIATVGRLRHRNLVQLLGWCRRRGDLLLVYDFMPHGSLDKYLFDETKAILSWEQRFKIIKGVASGLLYLHEEWEQTVIHRDIKAANVLLDSDMNGRLGDFGLAKQYEHGSNPSTTRVVGTLGYLAPELTRTGKPTTSSDVFAFGALLLEVACGRRPVESKALPEELILVDWVWDRWQVGAILDVIDPKLGGEFDELQAVVLLKLGLMCSNNSPEARPSMRQVVRYLEGEAVLPEVVPAPDALDVKKGEGAAGGGDGEFEDFVHSYPMSSYFDRASTWSLAGDDRDVDVEAGPASPLSLSSRREGR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0651 690 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 278 IPR013320 -
Glsi08g0651 690 FunFam L-type lectin-domain containing receptor kinase S.4 418 624 - -
Glsi08g0651 690 SUPERFAMILY Protein kinase-like (PK-like) 322 622 IPR011009 -
Glsi08g0651 690 Gene3D Phosphorylase Kinase; domain 1 326 417 - -
Glsi08g0651 690 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0651 690 CDD STKc_IRAK 347 613 - -
Glsi08g0651 690 ProSitePatterns Protein kinases ATP-binding region signature. 347 370 IPR017441 GO:0005524
Glsi08g0651 690 Gene3D - 24 261 - -
Glsi08g0651 690 SMART serkin_6 341 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0651 690 PANTHER - 14 622 - -
Glsi08g0651 690 FunFam Lectin-domain containing receptor kinase A4.3 326 417 - -
Glsi08g0651 690 Gene3D Transferase(Phosphotransferase) domain 1 418 623 - -
Glsi08g0651 690 MobiDBLite consensus disorder prediction 669 690 - -
Glsi08g0651 690 Pfam Legume lectin domain 26 272 IPR001220 GO:0030246
Glsi08g0651 690 Pfam Protein kinase domain 341 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0651 690 CDD lectin_legume_LecRK_Arcelin_ConA 27 262 IPR001220 GO:0030246
Glsi08g0651 690 FunFam L-type lectin-domain containing receptor kinase S.4 21 266 - -
Glsi08g0651 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0651 Glsi-ChrGlsi08 5151630 5153702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0651 18 669 Receptor kinase-like Gene Family AT3G55550 61.991 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi08g0651 Pkinase 6.2e-47 CL0016