Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0629 ATGGCAATTGGGTTCATGGAGGTGCAGCTGGTGAAAGCAAAGGGCCTTCAGGAGACTGATATCTTTGCTCGTATGGATCCGTATGTTCTGATACAATACAAAGGCCAAGAGCGCAAGAGCAGTGTACTCCATGAGCAAGGTTGCAATCCAGTATGGAATGAGAAATTTGTATTCAGAGTAGAATACCCTGGATCAGGCAACCAATATAAGCTCAATCTTAAAATCATGGACAAGGACGTATTTACTGCAGATGACTTCGTTGGCCAAGCCACAATCTACGTGGAAGATTTATTGGCACTAGGGGTAGAGAATGGAGTAGCTGAGCTTCATCCTCGCAAGTATAATGTGGTTCGTCAAGATCAATCTTATTGTGGAGAAATCGAAGTTGGCATAACTTTCACTCGGAAGGCAGTAGAGGAATCTATAGAGGAAGAACTTGGAGGATGGAAAGAAAGCTTCAATTAGGTAGAATACCCTGGACCTCGATCAGGTGATCGATGCAAATGCAAGCTCATATTCAAGATCATGGACAAGGACATCATATCAGCAGATGACTTTGTTGGCCAAGCCATAATCTATGCGGAGGATATATTGGCACAAGGAGCAGAGAATGGTGCAGCTGAGCTCCATCCTCTCAAGTATAGGGTGGTTCGTGCAGACCAATCTTATTGTGGCGAAATTGAAGTTGGTATAAGTTTCACCCGAAAGGTAGAAGAGGACTATGTTGGTGAAGAGATAGGAGGATGGAAGGAAAGCAGCTATTATTAG 768 0.4375 MAIGFMEVQLVKAKGLQETDIFARMDPYVLIQYKGQERKSSVLHEQGCNPVWNEKFVFRVEYPGSGNQYKLNLKIMDKDVFTADDFVGQATIYVEDLLALGVENGVAELHPRKYNVVRQDQSYCGEIEVGITFTRKAVEESIEEELGGWKESFNXVEYPGPRSGDRCKCKLIFKIMDKDIISADDFVGQAIIYAEDILAQGAENGAAELHPLKYRVVRADQSYCGEIEVGISFTRKVEEDYVGEEIGGWKESSYY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0629 255 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 134 IPR035892 -
Glsi08g0629 255 PANTHER C2 DOMAIN-CONTAINING 168 239 - -
Glsi08g0629 255 Gene3D C2 domain 148 247 IPR035892 -
Glsi08g0629 255 Pfam C2 domain 149 204 IPR000008 -
Glsi08g0629 255 Pfam C2 domain 6 101 IPR000008 -
Glsi08g0629 255 CDD C2_putative_Elicitor-responsive_gene 4 127 - -
Glsi08g0629 255 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 149 236 IPR035892 -
Glsi08g0629 255 Gene3D C2 domain 2 135 IPR035892 -
Glsi08g0629 255 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Glsi08g0629 255 SMART C2_3c 5 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0629 Glsi-ChrGlsi08 5029194 5033344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0629 3 109 C2H2 Transcription Factor Family AT4G21160 30.841 9.07e-12 62.4