Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0605 ATGAAGAGGGATCACCAAGAGACCTGTGCTGGTGCTAGCTATGGAGGAGGAGGAAGAAGTGGGAATACTGCTGCTGCTGCTGTAAAAGCTGAATGCTCATCAATGTCAAGCGGAAAAGCAAAGATGTGGGAGGAAGAACATGAAACGAGTGGGATGGATGAGTTGCTTGCGGCTTTGGGTTACAAGGTACGGTCGTCGGACATGGCTGATGTGGCACAGAAGCTTGAGCAGCTGGAGATGGTCATGGGCACAGCTCAGGAAGATGGAATTTCCCATCTTGCTTGTGACACCGTCCACTATGACCCTACTGATCTCTGTGGATGGGTACAGAACATGCTCACTGAGCTCAACAATTCTCCCAATCCTCTCGATCCATCGGTGCTGTTGGGGAACCAGCAAATTGACGACACAATTCTAGCTCCGGCGGAGTCCTCCACCATACCCAGCGTTGATTTCTCCAATTCCCGGCATCAGATCGACAATCAATCGCGTGTTTACAACGATGATTCAGAATACGACCTTAGAGCAATTCCTGGCATGGTAGCATACCCACAACACGAACAGTCCCCAGATAGGGAAAACAGCAACAAACGATTGAAGAGTTCACCAACCGGATCAGATTCTGTGCCGGTGCTACCATCGGCTTCGTTGCCATCGCCGGGGACCTTAACGGAGCCCACACGACCGGTGGTTCTCGTTGATTCACAAGAAACGGGTGTCCGTCTTGTCCACACGCTCATGGCTTGTGCAGAGGCAATTCAGCAGAACAATTTGAAGGTCGCAGAAACGCTTGTGAAGCACGTAGGCATGCTTGCAGCATCTCAAGCTGGAGCAATGAGAAAGGTAGCTTCCTACTTTGCCCAAGCTTTAGCTCGTCGAATTTATGGAATTTACCCAGAAGAAGCCCTCGATTCCTCTTTCTCTGATGTGCTCCAAATGCATTTCTACGAGTCATGCCCCTACCTCAAATTCGCCCATTTCACGGCAAACCAAGCCATTCTCGAAGCATTCGCCACCGCGAACAGAGTTCACGTCGTAGATTTCGGGCTGAAGCAGGGGATGCAATGGCCAGCGCTAATGCAAGCCCTCGCATTAAGACCTGGAGGTCCACCAACTTTCCGGCTCACCGGAATCGGCCCGCCGCAGCCGGACAACACCGATGCTCTGCAGCAAGTCGGTTGGAAGTTGGCGCAATTGGCCGACACCATAGGGGTCCAATTCCAATTCCGCGGGTTCGTCTGCAACAGTTTGGCGGATCTTGACCCATCCCTGCTCGAGATCCGACCCGGAGAGGCCGTCGCTGTCAACTCTGTTTTCGAGCTCCACCGCATGTTGGCGAGGCCCGGCGCTATCCACAAGGTGTTGAACACGATAAAGACATTTAAGCCGAAGATCGTGACCATAGTGGAGCAGGAGGCGAACCACAATGGACCAGTTTTCTTGGACCGTTTCACGGAGGCTCTGCACTACTATTCGAACCTGTTTGACTCGCTGGAGGGATCGTCGTCCGGGCTAACGCCGCCGAGCCAGGACCTGGTGATGTCGGAGCTGTATCTAGGGAGACAGATATGCAACGTGGTGGCGTGTGAAGGGTTGGACCGAGTGGAGAGACACGAAACGCTTAGCCAGTGGAGGGCAAGAATGGGATCGGCCGGGTTCGACCCGGTTCATTTGGGTTCGAACGCGTTCAAGCAAGCGAGCATGTTGTTGGCTCTGTTCGCCGGCGGTGATGGGTATAGAGTGGAAGAAAACACGGGGTGCCTCATGCTAGGGTGGCATACACGTCCGCTCATCGCCACCTCAGCGTGGAAGATTTCCGCCGGCGATCCGTAG 1833 0.5368 MKRDHQETCAGASYGGGGRSGNTAAAAVKAECSSMSSGKAKMWEEEHETSGMDELLAALGYKVRSSDMADVAQKLEQLEMVMGTAQEDGISHLACDTVHYDPTDLCGWVQNMLTELNNSPNPLDPSVLLGNQQIDDTILAPAESSTIPSVDFSNSRHQIDNQSRVYNDDSEYDLRAIPGMVAYPQHEQSPDRENSNKRLKSSPTGSDSVPVLPSASLPSPGTLTEPTRPVVLVDSQETGVRLVHTLMACAEAIQQNNLKVAETLVKHVGMLAASQAGAMRKVASYFAQALARRIYGIYPEEALDSSFSDVLQMHFYESCPYLKFAHFTANQAILEAFATANRVHVVDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLADTIGVQFQFRGFVCNSLADLDPSLLEIRPGEAVAVNSVFELHRMLARPGAIHKVLNTIKTFKPKIVTIVEQEANHNGPVFLDRFTEALHYYSNLFDSLEGSSSGLTPPSQDLVMSELYLGRQICNVVACEGLDRVERHETLSQWRARMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENTGCLMLGWHTRPLIATSAWKISAGDP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0605 610 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 185 600 IPR005202 -
Glsi08g0605 610 MobiDBLite consensus disorder prediction 147 169 - -
Glsi08g0605 610 ProSiteProfiles GRAS family profile. 233 604 IPR005202 -
Glsi08g0605 610 MobiDBLite consensus disorder prediction 199 223 - -
Glsi08g0605 610 Coils Coil 68 88 - -
Glsi08g0605 610 MobiDBLite consensus disorder prediction 1 21 - -
Glsi08g0605 610 FunFam DELLA protein GAI 51 116 - -
Glsi08g0605 610 MobiDBLite consensus disorder prediction 183 228 - -
Glsi08g0605 610 MobiDBLite consensus disorder prediction 147 161 - -
Glsi08g0605 610 Gene3D - 51 116 IPR038088 -
Glsi08g0605 610 SMART DELLA_2 53 126 - -
Glsi08g0605 610 Pfam Transcriptional regulator DELLA protein N terminal 53 120 IPR021914 -
Glsi08g0605 610 Pfam GRAS domain family 242 604 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0605 Glsi-ChrGlsi08 4878240 4880072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0605 1 606 GRAS Transcription Factor Family AT2G01570 58.946 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi08g0605 GRAS 5.1e-138 CL0063