Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0579 ATGTCTGACCGAGCTTCCCTCTTCTTGACATCGATTGGTTTGCTCAGCCTTTCCCTCCCTTATGATAAGTTCAATCCAGCTTCTAGCCATTCTAAAGAATCAAGATGGCCTTGCAGAACATTGGTGCTTCAAATCGTGATGATGCCCTATAGGTACAAGATGCCAAAAATGATATCCAAGATTGAAGGTAGAGGAAATGGCATCAGGACTAATGTTGTTAGCATGGTTAACATTGCAAAGACCCTGGCTAGACCTGCAGTTTACACTACAAAGTATTTTGGTTGTGAGCTTGGAGTCCACTCAAAATTTGATGGAGGGTTACAAATGTTTTTGTTGCATGCTTTAGAATCTTTTTGTGGGAAAGCAAGCAGAGAGGCAGTGAAGGAGGCTGCATTAATCTTGAAGGAGTTTTATGATTGTGATGTGTTGGTGGAGGAGTCTATACTTCAATGGTATGGTATTGGCAAGGCTCGGTTAGCAGCAACAAGAGCTCACAAATCTGGAAGGATGTCAAACCCTTCATTGAATGGCTTGAAAATGCTGAGTCTGAATCTGAGGAAAAATAAATAG 570 0.4158 MSDRASLFLTSIGLLSLSLPYDKFNPASSHSKESRWPCRTLVLQIVMMPYRYKMPKMISKIEGRGNGIRTNVVSMVNIAKTLARPAVYTTKYFGCELGVHSKFDGGLQMFLLHALESFCGKASREAVKEAALILKEFYDCDVLVEESILQWYGIGKARLAATRAHKSGRMSNPSLNGLKMLSLNLRKNK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0579 189 Pfam Domain found in IF2B/IF5 49 111 IPR002735 GO:0003743|GO:0006413
Glsi08g0579 189 SUPERFAMILY ARM repeat 103 151 IPR016024 -
Glsi08g0579 189 ProSiteProfiles W2 domain profile. 14 189 IPR003307 GO:0005515
Glsi08g0579 189 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 50 105 IPR045196 GO:0003743|GO:0006413
Glsi08g0579 189 Pfam eIF4-gamma/eIF5/eIF2-epsilon 108 157 IPR003307 GO:0005515
Glsi08g0579 189 Gene3D - 46 117 - -
Glsi08g0579 189 SMART eIF2Bneu4 49 143 IPR002735 GO:0003743|GO:0006413
Glsi08g0579 189 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 50 108 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0579 Glsi-ChrGlsi08 4717811 4718498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0579 80 155 Eukaryotic Initiation Factors Gene Family AT1G36730 40.789 2.40e-12 62.8