Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0572 ATGTCTTTCTCTCTTATTGAAGCCTGTAAAAAGAGAAAAAGATGGCCCAAGGTTTTCAGGTTTCACTCTTTCGCCGACCCTGGTTGCCCTATCTTCCCAACTGGACCTTTCCGAGATAACATTCGCCTCTTTCTTCAAGAATGTGCAGAGCTTGAAGACTACCATCTCCAGGGGATGCCCCTATGGTGCACTCTTCTTATCCACGAGAAATCAAACTTTATGGCCCCTCTCTATACTATTGAAGAGAACGTCTACCACTCTTCGCATCCCTTCTGCGACCATTGCCGATGTGCAGGCTGGAGCGGCCACTTTGTATCGAAGAGGAGGTACCATTTCATAATCCCCATCGACAATGGATGGCATAAACCCTTGGACGAAGGTGTTCTCGATAACCAGAGTCATCTCTTGCATGGGATGATTCATTGTAATGGGTATGGGCATTTGCTCTGTATCAATGGCATTGAAGGAGGCTCCAAATTTCTCAGTGGCAGAGAAATCATGGATCTCTGGGATAGAATATGTACAAATCTTCGAGCAAGGAAAATCGCAGTTGAAGATGCGTCAAAGAAAAGGTCTATGGATCTTCGCCTACTTCATGGAGTTGCCTATGGGCATTCTTGGTTCGGTAGGTGGGGTTACAGATTTTGTCGGGGAAGCTTTGGGGTAACACAGCACAATTACAACGCGGCCATCCAAGTTCTCGGTTTGCTGGAGCTTGACGAGGTCGTTCAATATTTTAGTAAGACAATTTTCCATAAAGAAATTAAACAAATAATTCGCTCCTACAGAGATATGAGTGAAACCCAGTTGATCACAATCAAGGATCTTCTCAGGTTTATGCTTACCATCAAGTCTCGTGCTCCTACTGCACCCAAGAAAATAGTCACTCTTACTGCTCCTCCTTCATCCTTCAGCTCAAGAAATTCAACGAGAAATGCAATTTCAAACAAACCAAACCCAATGAAGGAAAAATCTGTGAGGTATAAAAAGTTTAGTAATGCCGTGGCGAATATGGACAGCAGGTGGCCTGCAAGGCGACTAGAATACGCAGCCCAAGTTATTGTAGATGCACTGAAAGAGAACAAAGCAAATAATTCAGGTTCTGGTGGGATGACAAGGCAAGACGTGCGAGATGCAGCTCGGCTCCACATTGGTGACACAGGCCTACTGGATTATGTGTTGAAATCACTGAATAATGTAATTGTTGGGAACTACGTTGTTCGTCGCATGGTGAACCCGACAACTCGAATCCTGGAATATAACCTCCATGAGCTGGGCAATGGGTTCAAAGCCCCTGAACCAGAGCCCGAGTTAAAGGTTCCTGCGGAGACCCCAGCAGAGACAGATCAGCTTCCTGGCATGGATGTTTACAGTGATGTAGTTTATCTGTACAAGAATGTACTATTGGGTTACCCAGATTCAGAACCAGTGGACTTGGCAGTTCAGACAATTCTAGACAGCAGGCATTTTGTTAAGGATTGGGCATTGATTGACGAAATAGAGCAAGTATTGACATTCATTTGTCGCTTGAAACCAAACTTTGTTGACATTAAATCTGACTTGAACAAAGACCTGCCACCAGGAGAGATTGTCATGGTTCCACTGCATGCAACAGTTGGGGACTTGAAGCAAGCAGCTGAGACTGCTCTGAGGGACACTTATTGTATTGCAGAAAAAGTTATGGTGACAGATATTTCAGAGTTGGTGGGAGTGAGTGATGAGGAAGTGCTTTTCGGAGTGCTTGAGTCAGGTGTGGATGTTTGCGTGAGGGGAATTGGTATAGATTTGGATACTCCTTTGAAGTATCAGGGAGGGGCTGACAATTGGAAGGTGAGATGTGAGTGTGGAGCTCAGGACGATGATGGGGAGAGAATGGTGGCATGTGACATTTGTGAGGTATGGCAGCACACACGGTGCTGTGGCATAGATGACTCGGAGACAGTGCCACCACTGTTTGTGTGCTCAGGGTGCTGTGATACACTTGCACCCCCAAGGATTGAGTCTACCTTTGCCATGGACTGTGCTGATGCTTTTCTGGTTTCCCCAGAGCCTAATCACTTACTGGAGTTTGGATATGGGTACTGA 2085 0.4566 MSFSLIEACKKRKRWPKVFRFHSFADPGCPIFPTGPFRDNIRLFLQECAELEDYHLQGMPLWCTLLIHEKSNFMAPLYTIEENVYHSSHPFCDHCRCAGWSGHFVSKRRYHFIIPIDNGWHKPLDEGVLDNQSHLLHGMIHCNGYGHLLCINGIEGGSKFLSGREIMDLWDRICTNLRARKIAVEDASKKRSMDLRLLHGVAYGHSWFGRWGYRFCRGSFGVTQHNYNAAIQVLGLLELDEVVQYFSKTIFHKEIKQIIRSYRDMSETQLITIKDLLRFMLTIKSRAPTAPKKIVTLTAPPSSFSSRNSTRNAISNKPNPMKEKSVRYKKFSNAVANMDSRWPARRLEYAAQVIVDALKENKANNSGSGGMTRQDVRDAARLHIGDTGLLDYVLKSLNNVIVGNYVVRRMVNPTTRILEYNLHELGNGFKAPEPEPELKVPAETPAETDQLPGMDVYSDVVYLYKNVLLGYPDSEPVDLAVQTILDSRHFVKDWALIDEIEQVLTFICRLKPNFVDIKSDLNKDLPPGEIVMVPLHATVGDLKQAAETALRDTYCIAEKVMVTDISELVGVSDEEVLFGVLESGVDVCVRGIGIDLDTPLKYQGGADNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCSGCCDTLAPPRIESTFAMDCADAFLVSPEPNHLLEFGYGY 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0572 694 MobiDBLite consensus disorder prediction 301 320 - -
Glsi08g0572 694 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 9 664 - -
Glsi08g0572 694 SUPERFAMILY FYVE/PHD zinc finger 605 663 IPR011011 -
Glsi08g0572 694 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 600 662 IPR013083 -
Glsi08g0572 694 CDD PHD_MMD1_like 613 657 - -
Glsi08g0572 694 ProSitePatterns Zinc finger PHD-type signature. 613 657 IPR019786 -
Glsi08g0572 694 SMART PHD_3 612 658 IPR001965 -
Glsi08g0572 694 MobiDBLite consensus disorder prediction 301 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0572 Glsi-ChrGlsi08 4671495 4673915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0572 10 663 PHD Transcription Factor Family AT5G22260 33.857 1.34e-121 376