Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0571 ATGATGAGTGCTTCTTCCTCAAGAAAAGTGGACAAGGTTGAGCAAGTGGCCCCACATAAGGTTCGCAAGCCAAGGTGGATTGAGGCTTTCCTGAGAAAAACTTTCTTTGACTCTTGTGCAGCTCATCCATTTCGTAGGAATGAGTTAAATAAATACTGTATAAACTGCAATCGGTCAGCTTGCCAATATTGTGCTACTTCAGGTTCACATCGCTATCACAAGATACTTAAAATCTATAGGCATGTCTACAAAGATGTCGTTGCCCTTGTTGCTATGGAAAAGTATATTGACTGTTCACAAATTCAGCCTTACAAATGCAATAAGCGATTGGTTATTGCTCTGAATCCTCTTCCACACAGTGGTTCAGCATCAAATAATGAGGCATCATGCGAGATCTGTAGCAGAAGGCTGACTGATCCTGAGTTATATCGTTACTGCTCCATTTCTTGCAAGGTCCAAGCTGTTACAAGAAAGCCCAGTGATTCAGTTCCTCCCTTCATTTCCATCCAGAGTCCTCCTCAGGAAAAGCAAGAGGAAACTTCTGAACCCCAAAAGCCTCTGAACAAAAGAAAGGGAACACCCCGCAGAGCTCCCTTCTTCTAA 603 0.4295 MMSASSSRKVDKVEQVAPHKVRKPRWIEAFLRKTFFDSCAAHPFRRNELNKYCINCNRSACQYCATSGSHRYHKILKIYRHVYKDVVALVAMEKYIDCSQIQPYKCNKRLVIALNPLPHSGSASNNEASCEICSRRLTDPELYRYCSISCKVQAVTRKPSDSVPPFISIQSPPQEKQEETSEPQKPLNKRKGTPRRAPFF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0571 200 CDD Bbox2 39 78 - -
Glsi08g0571 200 Pfam B-box zinc finger 38 78 IPR000315 GO:0008270
Glsi08g0571 200 ProSiteProfiles Zinc finger B-box type profile. 39 78 IPR000315 GO:0008270
Glsi08g0571 200 Gene3D Classic Zinc Finger 33 78 - -
Glsi08g0571 200 MobiDBLite consensus disorder prediction 158 200 - -
Glsi08g0571 200 SUPERFAMILY B-box zinc-binding domain 39 80 - -
Glsi08g0571 200 MobiDBLite consensus disorder prediction 163 177 - -
Glsi08g0571 200 Pfam PLATZ transcription factor 80 152 IPR006734 -
Glsi08g0571 200 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 20 199 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Glsi08g0571 PLATZ 1e-20 No_clan