Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0561 ATGCCCTTGGAAGGGATTCTCATTGAGCCCACTTCAACTTCTCCTGATCTTTCCCTTCACATAAGTCCTCCAACCACCACCGCCTCTTCTTTTATTTACAATAACAGCACCAATCATGAATCCCACAATTCAAACACTAATTTCGCTCGTAGGACTGTGTCTCAAGCTCGCACTGAGCTGTGTCTTGGCAGGAATTCCAGTGGTGGAGCTATTGCAGAGGAACCTCCACCTAACCCTTATTATAATCAGAATAACCAGAGCCATTTCCATCATATCCACGACTCTACCACTCACTTAAACCCCATCAATTATGGAGTTTCATTGATTGATGTATCATCAGACGGGTTGAGGCCGATCAAGGGGATTCCGGTGTATCACAACCGTTCGTTCCCTTTCTTGCCCATGGACGATTCAAGAGACACGGATCCTCATCAGAAGATGCGCTTTTATCATCAAATGCCCTCTCTGTCCTCTCCTTTATCTTCTTTGCCTTCTTCGCCTTTGGATCCCATGTCCTCAGGTGCGTATAGGACAAGGTTTAATGGAGAAGCTTTCAAATCTCATCAATTGCACCACCACTCTCAATATGGAGTTGGCCCTTCTGAGGCCTCTTCTGGGTTCATGAGATCCAGATTTTTGCCTAAGCTACCCACCAAGAGGAGCATGAGAGCACCCAGAATGCGCTGGACCAGCACCCTTCACTCTCGATTTGTTCATGCCGTCGAACTTCTTGGCGGCCATGACAGAGCTACTCCAAAGTCAGTACTTGAGCTCATGGATGTGAAGGATCTCACGCTAGCTCATGTCAAAAGTCATTTGCAGATGTATCGAACAGTTAAAACCGCTGATAAGCCCGCAGCTTCTTCAGGCCACTCTGATGGGTCCGGAGAAGATGATATGTCTTCGATCCCCGGAGGCATCATTGATCGCGGTGGTCAAAGAGGCCGGGCAGATCGGTCAGAGCAACAGCAACGAGATATAGACTACTCTATTACCACGACTCTATGGAGTAATTCTTCAAGTAGTAGAGAGCCATGGTCACAAAATAATTCAAACCACATGGATAGTCTCAGACCACCTACCTTCCGGTCACAACCAATGTCAAGAGGGCATCAAATTCAGGAGTGTAATTCAACCCCGGTGAAGAACAATTTGTCAGGGTATAATATGGAGTGCAAGAACCCAAGCTTGGAGTTTACATTAGGAAGACCAGATTGGAATGGAAAAGGACAGGCCTAA 1239 0.4673 MPLEGILIEPTSTSPDLSLHISPPTTTASSFIYNNSTNHESHNSNTNFARRTVSQARTELCLGRNSSGGAIAEEPPPNPYYNQNNQSHFHHIHDSTTHLNPINYGVSLIDVSSDGLRPIKGIPVYHNRSFPFLPMDDSRDTDPHQKMRFYHQMPSLSSPLSSLPSSPLDPMSSGAYRTRFNGEAFKSHQLHHHSQYGVGPSEASSGFMRSRFLPKLPTKRSMRAPRMRWTSTLHSRFVHAVELLGGHDRATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTADKPAASSGHSDGSGEDDMSSIPGGIIDRGGQRGRADRSEQQQRDIDYSITTTLWSNSSSSREPWSQNNSNHMDSLRPPTFRSQPMSRGHQIQECNSTPVKNNLSGYNMECKNPSLEFTLGRPDWNGKGQA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0561 412 MobiDBLite consensus disorder prediction 1 21 - -
Glsi08g0561 412 SUPERFAMILY Homeodomain-like 222 278 IPR009057 -
Glsi08g0561 412 Gene3D - 224 281 - -
Glsi08g0561 412 MobiDBLite consensus disorder prediction 280 358 - -
Glsi08g0561 412 NCBIfam myb-like DNA-binding domain, SHAQKYF class 225 278 IPR006447 GO:0003677
Glsi08g0561 412 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 15 409 IPR044847 GO:0000976|GO:0006355|GO:0010158
Glsi08g0561 412 MobiDBLite consensus disorder prediction 326 358 - -
Glsi08g0561 412 FunFam Myb family transcription factor 223 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0561 Glsi-ChrGlsi08 4618185 4622619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0561 1 409 G2-like Transcription Factor Family AT5G16560 43.142 1.01e-76 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi08g0561 None None None