Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0547 ATGTCACAGGTTGTTCTTTTAGACTTTTGGGCAAGTCCATTTTGCCTGAGAGCAAAGATCGCTCTGGAAGAAAAAGGGGTGGCTCACGAGGATAGGGAAGAGAACTTATTTGGGGGAAAGAGCGAGCTCCTGCTCAAATCAAATCCCATTCATCAGAAAGTTCCTGTGCTCCTGCACAAGGGCAAACCTGTCCTTGAGTCCTCCAACATTGTGTCTTACATTGATGAGATCTGGCCTTCCAACCCCCTGCTTCCAACCAGTGCATATGAACGGGCAGAAGCTCGATTCTGGGCTGACTTTATTGACAAAAAGGTATTTGAAACTGGTAAGGGTATCTGGGCAAGCAAGGGAGAAGAGCAGGAAGTGGCCAAGAGGGACTTCATTGAAGTTCTGAAGCAGCTGGAGGGGGCTCTTGGGGAGAAGAATTTCTTTGGTGGTGAAGCCTTTGGCTATGTTGACATCCTCTTGATCCCTCTCACCTCTTGGTTTTTGGCTTATGAGAAGATAGGGGGCTTCAAGGTCCAAGACCATTGCCCCAAATTCTCATCCTGGATTAACAAGTGCTATCAGAGACCAACTGTTGCCAAAGTTCTGCCAGACCCAGAAAAGGTCTATGACTTTGTCCTCCAGATAAGGAAGAATCTAGGCCTTGATTAG 657 0.4734 MSQVVLLDFWASPFCLRAKIALEEKGVAHEDREENLFGGKSELLLKSNPIHQKVPVLLHKGKPVLESSNIVSYIDEIWPSNPLLPTSAYERAEARFWADFIDKKVFETGKGIWASKGEEQEVAKRDFIEVLKQLEGALGEKNFFGGEAFGYVDILLIPLTSWFLAYEKIGGFKVQDHCPKFSSWINKCYQRPTVAKVLPDPEKVYDFVLQIRKNLGLD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0547 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 82 IPR004045 -
Glsi08g0547 218 FunFam Tau class glutathione S-transferase 1 86 - -
Glsi08g0547 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 206 IPR045073 -
Glsi08g0547 218 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Glsi08g0547 218 SUPERFAMILY Thioredoxin-like 3 105 IPR036249 -
Glsi08g0547 218 CDD GST_N_Tau 4 78 - -
Glsi08g0547 218 Pfam Glutathione S-transferase, C-terminal domain 116 192 IPR004046 -
Glsi08g0547 218 Gene3D Glutaredoxin 1 86 - -
Glsi08g0547 218 SFLD Glutathione Transferase (cytosolic) 2 215 IPR040079 -
Glsi08g0547 218 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Glsi08g0547 218 CDD GST_C_Tau 88 211 IPR045074 GO:0004364|GO:0006749
Glsi08g0547 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 207 IPR010987 -
Glsi08g0547 218 Gene3D - 87 218 - -
Glsi08g0547 218 FunFam Glutathione S-transferase U20 87 218 - -
Glsi08g0547 218 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0547 Glsi-ChrGlsi08 4536815 4537984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0547 2 215 Glutathione S-transferase Gene Family AT1G78380 57.209 1.28e-86 253