Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0540 ATGGATCATACCCTTGGTTCTTTTTCCTCCCACTTTTCAAGCTTTTTGTCTTCTGTGCTTTTCCAGATACTTGCTATCTTTACACTCATCCAAACCCTGAAACTTCACTTGAGAGGTAAACCCAGGAAACAGAAACTCCCCCCGGGTCCCAAACCATGGCCTCTGGTGGGTAACCTCCCTGAAATGTTCGCAAACAAGCCCGTGTTCCGATGGATACACGAGCTTATGAATGATCTCAACACCGAAATTGCATGCATCAAACTGGGGAACGTTCATGTTATCCCAGTGAGTTGCCCCATTATTGCCTGTGAGTTCTTGAAGAAACAGGATGATGTCTTAGCATCAAGACCAATAAGCGTGTCCTCTCATCTTGCCTCTGGCGGGTATCTAACCGCAGCTCTGGGACCCTTCGGAGAACAATGGAAGAAGATGAAGAAAATGATCAGCAAGGACTTGCTTTCTCCAATGAAGCATCGATGGCTTCATGGTAAAAGAATGGAAGAAGCTGATAACCTTGTGCATTACGTGTACAGCAAATGCAAGAGTAAGAACAATGAAGGTGGACTTGTGAATGTGAGGATTGCTGCGCAGCATTTCTGTGGGAATGTGATTAGGAAAATTATCTTCAGTAGAAGGTACTTTGGAGAGGGTGGAAAAGATGGAGGGCCTGGTTTTGAGGAAAAGGAGCATGTAGATGCATTATTCACATTGCTCAAGTACCTTTATGCCTTCTGTGTTTCGGATTTTATGCCATTCTTGAGGGGACTTGACTTGGATGGCGATGAGAAGAAGGTGAAGGATGCTATGAGAATTATGAACAAGTATCATGATTCCATCGTCGAAGGGAGAATCAAACAATGGAAGGAAGGGACAAAGAGTGAAGCACAGGACTTGCTTGATGTTATGATCTCACTGAAAGATGACAATAATATGCCACTACTAACACCGGAGGAAATCAAAGCGCAAATTATAGAATTGATGATTGCAACAGTGGACAATCCATCAAATGCATTTGAATGGGGACTCGCAGAAATGATCAATCAGCCAGAGTTGCTGCAAAAGGCCACTGAAGAATTGGACAAAGTGGTAGGAAAAGAGAGGCTTGTGCAAGAATCAGATTTACCTAAGCTCAACTATGTCAAGGCCTGTGCAAGAGAAGCCTTTCGCCTTCACCCCATTGCTCCTTTCAGTGTTCCTCGTGTCTCTATGACTGACACTGTGGTTGCTAATTATTTTATCCCAAAAGGTAGTCATGTTTTACTGAGCAGACAAGAACTTGGACGAAACTCTAAATTCTGGAATGATCCTCACAAATTCAAACCAGAACGCCACCTCAAGGACGATGGATCTGAAGTGTTTTTGACTGAGTCAGATTTAAGGTTTATAACCTTTACTGCAGGAAAGCGTAGCTGTCCAGGAGTGGTACTTGGCACCTCAATCACTGTGATGCTATTTGCAAGGTTGATCCATGGCTTCACTTGGAGTGCACCACCCAATCAAACAAGCATCAACCTTGTTGAATCTGAAAGTGATCTCTTTCTTGCTGAGCCTCTTGTGGCCATAGCAAAGCCAAGATTACCAGCAAAAGTTTACCTGAATCACTGGTTGGAGAATATTGCGAGGAGGAAGAAGAGTAGGAACTGTTTTCAAGGGAAGCATGAAGAATTGGACAACGAAGCGTCGGTAATGGAGATAACCAGGATGAAGGAAGACCAGAAGGCGTTGGATTCAAGGAATGAATAA 1743 0.4372 MDHTLGSFSSHFSSFLSSVLFQILAIFTLIQTLKLHLRGKPRKQKLPPGPKPWPLVGNLPEMFANKPVFRWIHELMNDLNTEIACIKLGNVHVIPVSCPIIACEFLKKQDDVLASRPISVSSHLASGGYLTAALGPFGEQWKKMKKMISKDLLSPMKHRWLHGKRMEEADNLVHYVYSKCKSKNNEGGLVNVRIAAQHFCGNVIRKIIFSRRYFGEGGKDGGPGFEEKEHVDALFTLLKYLYAFCVSDFMPFLRGLDLDGDEKKVKDAMRIMNKYHDSIVEGRIKQWKEGTKSEAQDLLDVMISLKDDNNMPLLTPEEIKAQIIELMIATVDNPSNAFEWGLAEMINQPELLQKATEELDKVVGKERLVQESDLPKLNYVKACAREAFRLHPIAPFSVPRVSMTDTVVANYFIPKGSHVLLSRQELGRNSKFWNDPHKFKPERHLKDDGSEVFLTESDLRFITFTAGKRSCPGVVLGTSITVMLFARLIHGFTWSAPPNQTSINLVESESDLFLAEPLVAIAKPRLPAKVYLNHWLENIARRKKSRNCFQGKHEELDNEASVMEITRMKEDQKALDSRNE 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0540 580 Gene3D Cytochrome P450 39 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 SUPERFAMILY Cytochrome P450 47 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 CDD CYP79 81 526 - -
Glsi08g0540 580 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 18 531 - -
Glsi08g0540 580 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0540 580 FunFam Cytochrome P450 9 39 529 - -
Glsi08g0540 580 Pfam Cytochrome P450 47 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0540 Glsi-ChrGlsi08 4464662 4467779 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0540 4 531 Cytochrome P450 AT4G39950 52.731 0.0 595