Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0488 ATGGCTGACGACGAGCAAGAGGAACGCAAGAAAGCTTTGTGTAGTTGTGTTGAAGCAATCATGGCAGATGAGATACAAACTGATATTAAGGAGGAAGTTGCAGAAATTGTCCCATTTGACCCAACTAAGAAGAAGAAGAAAAAGAAAATTACAATTATAGACCCAGCTGATGATTCGGTGGACAAGTTGGCTGAGAAGGCAGAAAATCTGTCAGTGTCTGATGGGCTTGAGGCTACATTTACTGGTTTGAAAAAGAAGAAGAAGCCAGTTCAAACCAGTAGCTTGAATGATGAGAGCGGAGATGCAGTTGAAGATTTAGATGATCACACTGGAGAGGAAGAAGGAGAAGGCATTTCCCTGCAGCCTCATTATCCTTGGGAAGGGAGTGATCGTGATTATAAATATGAGGAGCTTCTTGATAGGGTGTTTAATATTCTACGTGAGAATAACCCAGAATTGGCTGGAGATCGGCGGAGGACAGTTATGAGGCCTCCACAAGTTCTTCGTGAAGGCACTAAGAAAACTGTTTTTGTGAATTTTATGGATCTATGCAAAACGATGCATCGTCAGCCAGACCATGTTATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCACTTGATGGTCAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTCGAAGGAATTCTGCGTCGATATATCAATGAATATGTTATTTGCATTGGATGCAAGAGTCCAGATACAATCCTTTCAAAGGAGAACCGTCTTTTCTTTCTCCGCTGTGAGAAGTGTGGATCAGGAAGATCTGTAGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAATGCAGGGACTTGA 864 0.4306 MADDEQEERKKALCSCVEAIMADEIQTDIKEEVAEIVPFDPTKKKKKKKITIIDPADDSVDKLAEKAENLSVSDGLEATFTGLKKKKKPVQTSSLNDESGDAVEDLDDHTGEEEGEGISLQPHYPWEGSDRDYKYEELLDRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0488 287 FunFam Eukaryotic translation initiation factor 2 subunit 130 272 - -
Glsi08g0488 287 Pfam Domain found in IF2B/IF5 156 265 IPR002735 GO:0003743|GO:0006413
Glsi08g0488 287 SMART eIF2Bneu4 157 266 IPR002735 GO:0003743|GO:0006413
Glsi08g0488 287 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 236 271 IPR016190 GO:0003743|GO:0006413
Glsi08g0488 287 MobiDBLite consensus disorder prediction 86 123 - -
Glsi08g0488 287 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 132 239 IPR016189 GO:0003743|GO:0006413
Glsi08g0488 287 Gene3D - 130 272 - -
Glsi08g0488 287 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 116 286 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0488 Glsi-ChrGlsi08 4082716 4088969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0488 21 283 Eukaryotic Initiation Factors Gene Family AT5G20920 77.154 2.33e-138 389