Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0476 ATGGTTGTGGGAATGTCTTGCTTTGCCCTGATTGCGTTGACTTTAATCACAGCTTTTATCTTCTCAAAACTTCTCTTCAAGAGTCAAAGCAAAAACATTCCAAAAGGGTCTCTGGGATATCCTATAATCGGAGAGACAAACAGTTTTCTCAAAGCACAGAGGCAAGACAAAGGATTTGACTGGTTGGAAGAACGGATATCTAAGTATGGTCCTGTTTTCAAAACCTCCTTAATGGGTTCCCCAACAGTGGTTATCAATGGCCAGGCAGGAAACAAATTTGTCATGAGCGCCTCAGATGATGTTTTCGCTTCTAAGAAACCCATCACCCTGCGAAAGATACTTGGAAAGCAAAGTTTATCCGAATTCACAGGATCAAGGTATAAATTGGTCAAAGGGGCAATGTCGAACTTCTTGAAACCAGAATGCCTTCAAAACTACGTCAAAGAGATGGATGAATTGGTGAATACAGAATTGTTAAAAAAAACAAGAGAGAATGAAACAATTGAAGCTGTGATATTCGTGAAGAAGCTTTCATTTGATATGGCATGCAACATATTGTTTGGAATTAAGGATAAGCACGCTAAGGACGCTTTGTTTGAAGATTTTGGTATAACCTTCAAGGCAATTTATTCTCTTCCCATTAACTTTCCTGGGACCACATTTTGGAGAAGCCTGAGAGCTAGGGCAAGGATTGTTAATAGAATACTTCCAATTATTAGCAAAAGAAGGGAAGAACTTTCAAAGGGGGTTCTGAGCTCAACAAATGATTTGCTCACCTGCTTGCTTGCTCTAAGGGATGAAAATCAAGAACCTCTAACTGATGATGCAATTACTGACAATTTTGTTTTCTCAGTCATTGCAAGTCACGACACATCTGCCACTCTTTTGAGCTTGATGGTATGGAAGCTGGCTAGAGATCCTAGCATTTACAAGAAAGTTTTAGAAGAACAAATGGACATTATAAAGCAGAGGGAGGAAGGAGCAGAAGACAGGCTAACATGGGCAGAGTTACAAAAGATGAAGTACACATGGAGAGTAGCTCAGGAGTTGATGAGGACGATCCCTCCTCTGTTTGGTGCCTTTAGGAAAGCACTTAAAGATACTAGCTTTGATGGATATGACATTCCAAAAGGGTGGCAGGTATATTGGACATCATATGGAACTCATATGAGCAATGATATATTCAAGAATCCTCAGGAGTTTGACCCATCTCGTTTCGAGAATCCAACAAAACCAATCCCTCCTTTTGCATACGTTGCTTTTGGTGCAGGACTTCGTAGATGCATAGGCAACGAGTTTGCCAGAGTTCAGACCTTGACCACCATCCACAACTTTATAAAGATGTACGATTGGTCTCTAGTGAACCCAGAGGAAGCTATTACCCGTCAACCAATGCCATTTCCATCCATGGGTCTCCCTATTAAGATTAAACCCAGATATTAA 1443 0.4061 MVVGMSCFALIALTLITAFIFSKLLFKSQSKNIPKGSLGYPIIGETNSFLKAQRQDKGFDWLEERISKYGPVFKTSLMGSPTVVINGQAGNKFVMSASDDVFASKKPITLRKILGKQSLSEFTGSRYKLVKGAMSNFLKPECLQNYVKEMDELVNTELLKKTRENETIEAVIFVKKLSFDMACNILFGIKDKHAKDALFEDFGITFKAIYSLPINFPGTTFWRSLRARARIVNRILPIISKRREELSKGVLSSTNDLLTCLLALRDENQEPLTDDAITDNFVFSVIASHDTSATLLSLMVWKLARDPSIYKKVLEEQMDIIKQREEGAEDRLTWAELQKMKYTWRVAQELMRTIPPLFGAFRKALKDTSFDGYDIPKGWQVYWTSYGTHMSNDIFKNPQEFDPSRFENPTKPIPPFAYVAFGAGLRRCIGNEFARVQTLTTIHNFIKMYDWSLVNPEEAITRQPMPFPSMGLPIKIKPRY 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0476 480 CDD CYP90-like 65 478 - -
Glsi08g0476 480 Pfam Cytochrome P450 34 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 SUPERFAMILY Cytochrome P450 30 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 FunFam Taxadiene 5-alpha hydroxylase 25 479 - -
Glsi08g0476 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Glsi08g0476 480 PANTHER CYTOCHROME P450 26 31 468 - -
Glsi08g0476 480 Coils Coil 311 331 - -
Glsi08g0476 480 Gene3D Cytochrome P450 25 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0476 480 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0476 Glsi-ChrGlsi08 3972712 3974730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0476 20 449 Cytochrome P450 AT4G19230 34.107 6.71e-74 239