Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0467 ATGTATGCCAATAAAGAGAACAAGGAGGATGGTAAAGCAGACTATGCTTACGTGGAAACCGACCCAACTGGTCGCTATGGCCGGTTTGGAGACATTCTAGGAAAAGGAGCAATGAAGACAGTGTACAGAGCTATTGATGAGGTCCTTGGAATAGAGGTAGCATGGAACCAAGTCAAACTCAATGAGGCACTTCGCACACCAGATGATTTGCAGCGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCACCAGTCCATAATACAATTCCATACATCCTGGATTGATGTTGATAACAAGACCTTCAACTTCATTACAGAAATGTTCACTTCAGGGACACTCAGAGAATACAGGAGGAAATATAAGCAAGTTGGCATAAAAGCAATAAAGAGCTGGACTCGCCAAATTTTACAGGGCCTTGTTTATCTACATGGCCATGATCCTCCGGTAATACATAGGGACCTCAAATGTGATAACATATTTGTCAATGGCCATCTTGGTCAGGTGAAAATTGGTGACCTAGGACTAGCAGCAATTCTCCGTGGTTCCCAGTTGGCCCACAGTGTTATAGGCACCCCCGAGTTCATGGCACCAGAATTATATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTAGAAATGCTTACATCTGAATATCCATATAGTGAATGTGCTAACCCTGCACAGATCTACAAGAAAGTGACATCGGGAAAGCTACCAGCAGCACTTTTCCGGATTGAAGACATGGAAGCACGCAAGTTTATTGGAAAATGCTTGGTAACGGCAGCAAAGAGACCATCGGCAAAGGAATTATTGCTTGACCCATTTCTTTTGTCCAATGATGCATTACTAAACACAAAGTTTGAAATTCAAAAGCCATTTTTGAATGAAAATGAGATGGAAAATTTGCATTTGACTGATGATTCACCAAGGACTGAAATGAAAATCACAGGGAAGCTGAATCCTGAGGATGATACTATTTTTCTCAAAGTGCAAATTGCTGATAAAGATGGTTCTTTGAGGAACATATATTTTCCGTTTGACATCTTCACAGACACTCCCATTGATGTTGCAACGGAGATGGTGAGAGAGTTGGAGATCACTGATTGGGAGCCATTTGAAATTTCAAACATGATTGAAGAAGAGATATCTGCTCTGCTGCCACATAGGAGGAATAGGGACTGTTTGGACACCTATCATATGTACAATTATCAAAATGACGATGATGGACCTCATCATCATTTCCGTTCATTGTCTTCTTGTTCATCCCAAGAATCAGTATCGGTCATAGTCACAAAAGGCGAGGAAATACCAAATGGATATTACTGGCTCCATGATGATTTGCTTGATGATTCGAGTTCACGTTGCTCTTCGCAAGGGACATATTCCACCTTGAATTATTTTTCTGTGGATGACCAGGAATATAATGTAACTTCTACAAGAAAAGATAAACAACCCATCATTAAGAGCCACAAGTGTAAAATGTTTTCCCCTGGCGAAGACCTAAGAACTGGCTTGTCTAGAATCTGTTGCAACCAGTGTAAAGTTCTAGTGGGACCAAAGGCTGCTTCTACCAGTAAAAATAATAGGATGGACAATCATAGATTAACAAGGAACAGGTCACTTATTGATGTACATAGCCAGATACTCCACCGATCCCTGGTAGAGGAGGTAAACAAGAGACGTTTATTCAAGACTGTTGGAGCAGTGGAAAATATTGGATTTCAGACACCTTGTGAGGTTTCCAGAAATAACTCACTACCAGTATGTGGTGCTTTAGATGTGATGTCTTCAAGGAGCAGCAAGGGACAAGGATTTCAAAGCTAA 1851 0.4106 MYANKENKEDGKADYAYVETDPTGRYGRFGDILGKGAMKTVYRAIDEVLGIEVAWNQVKLNEALRTPDDLQRLYSEVHLLSTLKHQSIIQFHTSWIDVDNKTFNFITEMFTSGTLREYRRKYKQVGIKAIKSWTRQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQLAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPAALFRIEDMEARKFIGKCLVTAAKRPSAKELLLDPFLLSNDALLNTKFEIQKPFLNENEMENLHLTDDSPRTEMKITGKLNPEDDTIFLKVQIADKDGSLRNIYFPFDIFTDTPIDVATEMVRELEITDWEPFEISNMIEEEISALLPHRRNRDCLDTYHMYNYQNDDDGPHHHFRSLSSCSSQESVSVIVTKGEEIPNGYYWLHDDLLDDSSSRCSSQGTYSTLNYFSVDDQEYNVTSTRKDKQPIIKSHKCKMFSPGEDLRTGLSRICCNQCKVLVGPKAASTSKNNRMDNHRLTRNRSLIDVHSQILHRSLVEEVNKRRLFKTVGAVENIGFQTPCEVSRNNSLPVCGALDVMSSRSSKGQGFQS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0467 616 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Glsi08g0467 616 SUPERFAMILY Protein kinase-like (PK-like) 28 318 IPR011009 -
Glsi08g0467 616 CDD STKc_WNK 25 285 - -
Glsi08g0467 616 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 444 - -
Glsi08g0467 616 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Glsi08g0467 616 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Glsi08g0467 616 Gene3D - 319 403 - -
Glsi08g0467 616 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0467 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Glsi08g0467 616 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0467 616 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Glsi08g0467 616 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0467 Glsi-ChrGlsi08 3887134 3891761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0467 17 591 MAP Kinase Kinase Kinase AT5G58350 59.316 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi08g0467 Pkinase 8.2e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0467 08 3887134 3891761 Glsi08g0467 08 3887134 3891761 ECH