Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0456 ATGGACATGAGCAAGGCTATAATCATTGAACTATTTGAAGGATTAGCTCAAATCCTGCGGATTAGAACTGAAAGAACTTTGATTGCTGTTTGCGTTTGTGCCTCAAAGAAAGTCTTTCCTCCTCACAACCCACCACTTAGATCAACACAATCAACAGGCATGCTTGGATGTCCAGAGTCAGAAAGAATAGGAGAGATAGCAAAGAAGACAGCCGCAGAATCAGAAGCATCTTGTCAAATGGGAAGGAGGCATTTTTATGGCCCAGCTTCAGGGACGAGCTTAAACACAGTCACTCCTTGTGCTGCATGTAAGCTTTTGAGAAGAAGATGTGCTGAAGAATGCCCTTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCAGCTGTTCATAAAGTGTTCGGTGCAAGCAATGTCTCCAAGATGCTAATGGAAGTGCCTGAGAGCCAAAGACCTGATGCTGCAAGTAGTCTGGTTTATGAAGCTAACTTGAGGTTGAGAGACCCAGTTTATGGATGCATGGGTGCAATATCAACTTTGCAGCAGCAAGTTCAATCTTTGCAAGCTGAACTAAATGCAATAAGAACTGAGATACTAAAATACAAATATAGAGAGGCTGCGAGTCAAATCATTTCTTCTCATGGGCCTTTGGTTTCTTCTGTGGAGGAACCCATTTCTGCAGAGTCACAAGGTCTTCCTCAACCTCCTCCACCATCAGCACCTCTTCTTCCTCCTCCTTCAAAACCATTACCTTCCCCTTCAGTTGTTCTTTCTTCCTTGTCTTCATCTTCCACTTCTTCTGTATACACGCCACCTAAAAGCACATTAAACCATGGATCCATTTCCTGTGAGAATGTCCCATACTTTGCCTGA 876 0.4338 MDMSKAIIIELFEGLAQILRIRTERTLIAVCVCASKKVFPPHNPPLRSTQSTGMLGCPESERIGEIAKKTAAESEASCQMGRRHFYGPASGTSLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPESQRPDAASSLVYEANLRLRDPVYGCMGAISTLQQQVQSLQAELNAIRTEILKYKYREAASQIISSHGPLVSSVEEPISAESQGLPQPPPPSAPLLPPPSKPLPSPSVVLSSLSSSSTSSVYTPPKSTLNHGSISCENVPYFA 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0456 291 MobiDBLite consensus disorder prediction 223 278 - -
Glsi08g0456 291 ProSiteProfiles LOB domain profile. 98 199 IPR004883 -
Glsi08g0456 291 Coils Coil 178 198 - -
Glsi08g0456 291 MobiDBLite consensus disorder prediction 231 253 - -
Glsi08g0456 291 Pfam Lateral organ boundaries (LOB) domain 99 195 IPR004883 -
Glsi08g0456 291 MobiDBLite consensus disorder prediction 254 278 - -
Glsi08g0456 291 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 95 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0456 Glsi-ChrGlsi08 3810560 3813051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0456 61 209 AS2 family AT2G30340 72.848 1.72e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi08g0456 LOB 1.1e-40 No_clan