Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0450 ATGAAAATTATTCATATTGAGTGTGCATGCTTAATAACAAGGCAAAGTAATAATGCATACATGTATAGTGCCATTCCTTTTCTGACAATAATGGCAATTCCATATTGTTACAAAGCTAGCTTATGTGTGTTATTTGCAGTGTTTGGCTTAGCCTCTGCTCAGCTTTCTTCAAATTTCTACGACACATCATGCCCAAAAGCCCTCTCTATCATAAGAACTGCAGTGCTCAATGCAGTTTACAAAGAGCATCGCATGGGCGCTTCCTTGCTCCGCCTCCATTTCCACGATTGCTTTGTTAATGGATGTGATGCATCAGTTCTATTAGATGACACTTCGAGCTTCACTGGGGAGAAGACAGCGGCTGGAAATATTAATTCTCTGAGAGGTTTTGAAGTGATTGACGATATTAAAACTCAGTTGGAGACTGCTTGTCCCGCTACTGTTTCTTGTGCAGATATTGTAGCTGTTGCAGCCCGTGATTCCGTTGCCACTTTAGGCGGGCCATCATGGACAGTTGAGTTAGGCAGAAGAGACTCAACAACGGCAAGTAAAGACGCTGCCACTCAGGATATCCCATCCCCTTTGATGGATCTTAGTGCCCTTATTTCTGCTTTCTCAAAGAAGGGTTTTACCGCCAAAGAACTGGTAGCCCTCTCAGGAGCACATACAACGGGACAAGCCAGATGCCAGTTATTCCGAGGTCGGATTTATAACGAAACCAGCATTGATTCAGATTTTGCAACATCAGTGAAGTCAAATTGTCCTAGCCTTGGCGGTGACAACAATCTTTCCCCACTTGACGTGACCACCAATGTTTTATTTGACAATGCTTATTTTAAGAATCTGATCAACAAAAAAGGGCTTCTGCATTCAGATCAGCAGCTTTTTAGTGGCGGTTCCACAGACTCTCAGGTCACTACCTATAGCACCAACCCTGCAACTTTCTATATAGACTTCGCGAACGCTATGATCAAAATGGGGAACATCACCCCTTTAACAGGAACAAGTGGTCAGATTCGCACTAATTGCCGCAAAGTTAACTAA 1044 0.432 MKIIHIECACLITRQSNNAYMYSAIPFLTIMAIPYCYKASLCVLFAVFGLASAQLSSNFYDTSCPKALSIIRTAVLNAVYKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKTAAGNINSLRGFEVIDDIKTQLETACPATVSCADIVAVAARDSVATLGGPSWTVELGRRDSTTASKDAATQDIPSPLMDLSALISAFSKKGFTAKELVALSGAHTTGQARCQLFRGRIYNETSIDSDFATSVKSNCPSLGGDNNLSPLDVTTNVLFDNAYFKNLINKKGLLHSDQQLFSGGSTDSQVTTYSTNPATFYIDFANAMIKMGNITPLTGTSGQIRTNCRKVN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0450 347 FunFam Peroxidase 58 197 - -
Glsi08g0450 347 ProSiteProfiles Plant heme peroxidase family profile. 54 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 Pfam Peroxidase 74 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 CDD secretory_peroxidase 54 346 IPR033905 GO:0004601|GO:0042744
Glsi08g0450 347 FunFam Peroxidase 192 326 - -
Glsi08g0450 347 SUPERFAMILY Heme-dependent peroxidases 54 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 Gene3D - 58 344 - -
Glsi08g0450 347 PRINTS Haem peroxidase superfamily signature 166 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Haem peroxidase superfamily signature 267 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Haem peroxidase superfamily signature 86 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Haem peroxidase superfamily signature 148 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 Gene3D Peroxidase, domain 2 192 326 - -
Glsi08g0450 347 PRINTS Plant peroxidase signature 64 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Plant peroxidase signature 265 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Plant peroxidase signature 166 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Plant peroxidase signature 128 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Plant peroxidase signature 213 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Plant peroxidase signature 321 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Plant peroxidase signature 88 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PRINTS Plant peroxidase signature 147 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 PANTHER PEROXIDASE 72-RELATED 50 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi08g0450 347 ProSitePatterns Peroxidases active site signature. 86 97 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0450 Glsi-ChrGlsi08 3771429 3777501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0450 50 347 Peroxidase AT5G05340 63.000 1.09e-137 392