Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0443 ATGCGCTTAGGATTAACATCAAGCCATTATAGTAATCCATCTGAAAAGGATACGTGGAATCTTGTGATTTCAAAGTTTGTAGACGACCAATGGCATTTGGCAACTTACCTTGGGCTTCTAGCCCTTCCATCCTTCAGCTTCTCAACTTATAAAACCCACAAGCCCCACCCCATCTTATTAGCCAAGAAGTGCAGTTCAAGTTTTCTTACGAGCTTCTTCAATATGCCTTCAACCGCTCTTCAATGGCTAAGCCTCGTTGGCATCATTTGGCTCCAAGCCATAAATGGGACAAACACCAATTTCCCAGCTTACTCCTCCCAGCTCAAGCAGCTCCTTTCCATCTCCCAAGTGCAGCTCAATAACCTTGCTTTTGCGTCTGATGCAGGGAAGCTTTTTGGCTGGTTTTCTGGCATGGCTGCTGTTCATCTCCCTCTCTGGCTTGTCCTCGTGATCGGCTCAACTCTTGGGTTGATTGGCTATGGAGTTCAATATCTCTTCGTAACTAACCAAATTTCCTCTCTTTCCTATTGGCATGTCTTCTTACTAACCGTTCTGGCTGGGAATAGCATTTGCTGGATTAACACTGTCTGCTATGTCGTCGCACTAAGGAACTTCCCTTCTGATCACCAAGTTGCTGTGGGGTTAACAACTAGTTACCAAGGATTAAGTGCAAAGATTTATACCAATATTGTTGATGTTATTTCTCCACACAAAAAAGCTAGATCCTTTCTTTTTCTGAACTCTATTGTACCAGTGATGGTGAGCCTAATAGCAGCTCCTGTAACCAGAGAAATTGAAGTCACAAGGCCTAAGCAAATGGGCGTTGGATTTGTTGTAATGTTTGTGATTACAATTGCAACTGGCGTATATGCTGTGATCAGCAGTTTACAATTTGTATCAAGCAAATTACCTCCACTGAGTAATCTGATTGGTATTCTAGTGTCCCTTCTCCTCCCTCTATTAGTTCCAATCTCACAGAAGATCAAGGAATTAGTGGGGTCATGGCAAGCAAAAAGAGAGAGACAAAGAGTCTATGATTTTACTGTGGAGGAGAATGCTAATGAAGAGAGAACAGAGAATGAGGTGAAAGAGGAAGAGGGAGAAGATAGCAGCAGAGAAGTTCATGAAGTTGGAGTCAGAGAAGAGATTGGAGTGAAGTTGATGCTGAGAAGAATAGATTTCTGGTTATATTTCTTTGTGTATTTTTTTGGTGCAACACTTGGTTTGGTGTTTCTGAACAACTTGGGACAAATAGCTGAATCCCGGGGTTACTCTAATACTTCATCTCTGGTTTCCTTGTCTTCATCTTTTGGGTTCTTTGGCCGTCTCATGCCATCCCTCATGGACTACTTCTGCAGGGGTAAGTTTAGGATTTCAAGACCAGCATCTATGATGGCATTGATGCCTCCAATGGCAGGAGCATTCTTCTTACTGCTAAACAAAACTGAACTTGCCCTCTACACCAGCACTGCCATAATTGGGGTGTGTACTGGAGCAATCACTTCAATTTCTGTGTCCACAACCACCGAGCTATTTGGCACCAAGAATTTCTCTGTGAACCATAACGTAGTGGTGGCCAACATTCCCATTGGCTCCTTTTCGTTTGGCTTCTTGGCTGCTCTTCTCTACCGCAAGGAAGAACATGGACAAGGGAAATGCATGGGCATGGAATGTTACAGAAACACTTTCATCATCTGGGGCTTCCTTTGTTTCTTTGGCACCTTCTTGGCTTTGGGTCTACATGTTAGGACTCGCAAGTTCTATTCACAAAGACTATAG 1779 0.4328 MRLGLTSSHYSNPSEKDTWNLVISKFVDDQWHLATYLGLLALPSFSFSTYKTHKPHPILLAKKCSSSFLTSFFNMPSTALQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGMAAVHLPLWLVLVIGSTLGLIGYGVQYLFVTNQISSLSYWHVFLLTVLAGNSICWINTVCYVVALRNFPSDHQVAVGLTTSYQGLSAKIYTNIVDVISPHKKARSFLFLNSIVPVMVSLIAAPVTREIEVTRPKQMGVGFVVMFVITIATGVYAVISSLQFVSSKLPPLSNLIGILVSLLLPLLVPISQKIKELVGSWQAKRERQRVYDFTVEENANEERTENEVKEEEGEDSSREVHEVGVREEIGVKLMLRRIDFWLYFFVYFFGATLGLVFLNNLGQIAESRGYSNTSSLVSLSSSFGFFGRLMPSLMDYFCRGKFRISRPASMMALMPPMAGAFFLLLNKTELALYTSTAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVVVANIPIGSFSFGFLAALLYRKEEHGQGKCMGMECYRNTFIIWGFLCFFGTFLALGLHVRTRKFYSQRL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0443 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 82 589 - -
Glsi08g0443 592 MobiDBLite consensus disorder prediction 350 370 - -
Glsi08g0443 592 CDD MFS_Mch1p_like 80 574 - -
Glsi08g0443 592 SUPERFAMILY MFS general substrate transporter 97 586 IPR036259 -
Glsi08g0443 592 Pfam Nodulin-like 81 324 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0443 Glsi-ChrGlsi08 3714265 3717662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0443 75 591 Nodulin-like Gene Family AT2G30300 49.432 3.35e-160 466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0443 08 3714265 3717662 Glsi10g2863 10 54027110 54029022 CCT
Glsi08g0443 08 3714265 3717662 Glsi08g0443 08 3714265 3717662 ECH