Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0441 ATGGCAAACCACAAGACACCCTTCTCAGTTGCTACGACGGATGTTGTGCTTGTTAAACCATCAAAACCTACACCTTCAGTTGTTCTGTCTCTGTCTACTATTGACAATAATCCCGACCTTAACATCCTTTGTCAAACCATTTATGTCTACAGAGCAAACCTTGATCATTCCCCTAATGCCCAACTAGACCCATCCTGTGTAATAAAAGAAGCTCTCTCAAAGGCTTTGTTCTACTATTACCCTCTTGCAGGGATGCTAATAACACACGGTGATGGAAAACTCAGAATCAACTGTAACGCTGCTGGAGTTCCATTCTTAGAGGCAACTGCTACATGTGAACTCTGTTCTCTTTATTACCTAGATGGGATCAACGTTGAAACAGCAAAACAGTTCGTGTTTAATTATCCTTCTCAAGATGAAGGTCACCATCCCTTGGTATTGCAGGTGACCAAGTTTCTCTGTGGAGGATTCACCATTGGAATGGGCTTGTCCCATTCTGTTTGTGATGGGTTTGGAGCATCTCAGTTCTTCCGAGCCATGACTGAACTTGCTAGCGGCAAAAGCGAGCCCTCTGTGAAACCTGTGTGGGAGAGAGAGAGGCTAATAGGGACAATTCTCAAAGAACCAATCCAGTTTCCCATGGATAAGGCTTCTGCTGCAGTTTCCCCATTTTGGCCTAGTTCAGAACTTCTGCATGAATCCTTCAACGTGGACAGCGAGAGCGTGAGAAGACTCAAAATGAGCCTCATGAAGGGAAGTGAAACCATGAAGGAAAGCGTCACAACTCTGGAATCACTTGGTGCCTACGTTTGGAGGTCAAGAGCAAGGGCTTTGAGATTGAGCTCTGATGGGAAAACATTGTTATGTTTAGCAGTTGGGGTGAGACGACTACTGAATCCACCTTTGCCTGATGGGTATTATGGGAATGCTTTTGTGCCTGCAAATGTGGTGCTAACAGTGAAGGAACTCAAGGAAAAACCACTCGCCGAGGTTGTGAAGCTCATTAAAGACAGCAAAAAGGTTGCTTTTAATACTGATTACATCAGAAACTCCGTCAACATATTGGAGACGATGAGACAAGTGAACACTAAGATTGAAGGAACAGGTTCGTCCACAGTATTAACAGATTGGAGGCAATTGGGTTTGCTGGAAGAAGTGGACTTTGGATGGAAGGCTTCAGTGAACATAATACCAGTACCATGGAGCATGTTTGGGTACGTGGATTTGTGCCTTTTCTTGCCTCCTAGTCATATGGATCCTTCAATGAAAGGTGGGGTTAGGGTTTTTGTATCCCTCCCAGAAGCTGCCATCCCCAAGTTCAGGGAAGAGATGGAGGCCCTCAAGCATATAAGCGGCGATGAGGGTGGCATTTAG 1374 0.4505 MANHKTPFSVATTDVVLVKPSKPTPSVVLSLSTIDNNPDLNILCQTIYVYRANLDHSPNAQLDPSCVIKEALSKALFYYYPLAGMLITHGDGKLRINCNAAGVPFLEATATCELCSLYYLDGINVETAKQFVFNYPSQDEGHHPLVLQVTKFLCGGFTIGMGLSHSVCDGFGASQFFRAMTELASGKSEPSVKPVWERERLIGTILKEPIQFPMDKASAAVSPFWPSSELLHESFNVDSESVRRLKMSLMKGSETMKESVTTLESLGAYVWRSRARALRLSSDGKTLLCLAVGVRRLLNPPLPDGYYGNAFVPANVVLTVKELKEKPLAEVVKLIKDSKKVAFNTDYIRNSVNILETMRQVNTKIEGTGSSTVLTDWRQLGLLEEVDFGWKASVNIIPVPWSMFGYVDLCLFLPPSHMDPSMKGGVRVFVSLPEAAIPKFREEMEALKHISGDEGGI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0441 457 Gene3D - 5 209 IPR023213 -
Glsi08g0441 457 Gene3D - 226 444 IPR023213 -
Glsi08g0441 457 PANTHER ACYL TRANSFERASE 4 8 446 - -
Glsi08g0441 457 Pfam Transferase family 9 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0441 Glsi-ChrGlsi08 3701156 3702529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0441 14 407 Monolignol Biosynthesis Gene Families AT5G48930 28.883 9.69e-36 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0441 08 3701156 3702529 Glsi08g0441 08 3701156 3702529 ECH