Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0433 ATGGCCTCTTCTTCTGGTAGCTTAGATACCTCTGTAAACTCCCACCTCAACTTCACTTTCTCTACACACCCATTCATGACCACATCCTTCTCCGATCTTCTTGCTTCTCCCATCGATGATAACCCAGTCTCCTCAGCCGTCGATAAGCCACGCGGGTTCTCGGATCGTATAGCTGAACGAACTGGGTCGGGTGTGCCTAAGTTCAAGTCGATCCCACCTCCATCCCTGCCTCTCTCTCCCCCTGCCATTTCTCCGTCTTCTTACTTTGCTATCCCTGCTGGATTAAGCCCAGCTGAGCTTTTGGACTCTCCGGTTCTCCTTAATGCTTCTAACATTTTGCCATCTCCAACCACTGGAGCATTTGGTGCTCAGAACTTCAATTGGAAGAGCAGCTCTGGAGAGAACCAGCAAAATATCAAACAAGAAGAGAAAAACTTCTCAAGTTTCTCGTTCCAACCCCAACCTAGGCCTCCTCTTCCACTCACAACAACGTTTCAATCCTCAGCTACCTCAATCCAACCACAACAGGCATGGAGTTTTCAAGAAGCCACCAAGCAAGATAGTTTTTCTTCCGGAAAGAGTATGGTGAAAACCGAAACTATGCAGAATTTTGGCACCGAGATTGTTAGTGTCCAAACAAACCATAACAACGGATTTCAATCGGATTATAGCAATTACCACCCTCAATCTCAGACCTTGAGCAGAAGATCAGATGATGGGTACAATTGGAGAAAATATGGGCAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTACTACAAATGCACATACCCCAATTGCCCAACAAAGAAGAAGGTTGAGAGGTCTTTAGATGGGCAGATCACTGAGATAGTTTACAAGGGCACCCATAACCATCCCAAGCCTCAGGCTACGAGGAGAAACTCATCATCTGCCTCTTCTCATGCACTTCCTCCTTCAAATGCAGTCAGCGCTGAAATCCCAGATCAATCATTTGCCACCCACGGCAGTGGACAAATGGATTCGGTTGCAACACCAGAGAACTCGTCAATATCAATCGGAGATGATGATTTTGAGCAGAGTTCCCAGAGGAGTAAATCAGGAGGAGATGAGCTTGATGAAGATGAACCTGATGCCAAAAGATGGAAAATAGAAGGTGAAAATGAGGGTGTATCGGCACCTGGAAGTAGAACAGTGAGAGAACCCAGAGTTGTAGTCCAGACAACCAGTGACATAGATATTCTAGATGATGGGTACAGATGGAGGAAGTATGGGCAGAAAGTAGTCAAGGGCAATCCAAATCCAAGGAGTTACTACAAATGTACACACCCAGGATGCCCAGTGAGAAAGCACGTAGAGAGAGCCTCACATGACCTGAGGGCAGTGATCACAACCTACGAGGGAAAACATAACCATGATGTCCCTGCAGCCCGTGGCAGTGGTAGCCATTCTGTGAACAGACCTCTGCCAAACAATACCACAAACACCAACAATGCAGCCACTGCTGCCATAAGGCCCTCGGCTGTTCCACACCACACTAACAATTCCATCAACAATTCTCTTCAGGGTTATAGAGCAACAGCAGTACCAGAAGGGCAATCACCCTTCACCCTAGAGATGCTGCAGAGCCCAGGAAGTTTTGGATTCTCAGGGTTTGGGAACCCAATGGGGTCTTACATGAATCAGCAGCAATCGCAATCTGACAATGTATTTTCTTCCTCCAGATCAGCCAAGGAGGAGCCCAGAGATAATGACACGTTTCTTGAATCTTTGCTATGCTGA 1764 0.4671 MASSSGSLDTSVNSHLNFTFSTHPFMTTSFSDLLASPIDDNPVSSAVDKPRGFSDRIAERTGSGVPKFKSIPPPSLPLSPPAISPSSYFAIPAGLSPAELLDSPVLLNASNILPSPTTGAFGAQNFNWKSSSGENQQNIKQEEKNFSSFSFQPQPRPPLPLTTTFQSSATSIQPQQAWSFQEATKQDSFSSGKSMVKTETMQNFGTEIVSVQTNHNNGFQSDYSNYHPQSQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQATRRNSSSASSHALPPSNAVSAEIPDQSFATHGSGQMDSVATPENSSISIGDDDFEQSSQRSKSGGDELDEDEPDAKRWKIEGENEGVSAPGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPLPNNTTNTNNAATAAIRPSAVPHHTNNSINNSLQGYRATAVPEGQSPFTLEMLQSPGSFGFSGFGNPMGSYMNQQQSQSDNVFSSSRSAKEEPRDNDTFLESLLC 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0433 587 SMART WRKY_cls 237 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 SMART WRKY_cls 409 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 101 494 IPR044810 GO:0003700
Glsi08g0433 587 MobiDBLite consensus disorder prediction 215 237 - -
Glsi08g0433 587 MobiDBLite consensus disorder prediction 547 587 - -
Glsi08g0433 587 Gene3D WRKY domain 396 462 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 MobiDBLite consensus disorder prediction 296 352 - -
Glsi08g0433 587 SUPERFAMILY WRKY DNA-binding domain 236 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 ProSiteProfiles WRKY domain profile. 238 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 MobiDBLite consensus disorder prediction 547 568 - -
Glsi08g0433 587 ProSiteProfiles WRKY domain profile. 404 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 MobiDBLite consensus disorder prediction 287 391 - -
Glsi08g0433 587 Gene3D WRKY domain 223 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 MobiDBLite consensus disorder prediction 465 491 - -
Glsi08g0433 587 MobiDBLite consensus disorder prediction 44 73 - -
Glsi08g0433 587 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 Pfam WRKY DNA -binding domain 410 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 FunFam WRKY transcription factor 227 297 - -
Glsi08g0433 587 MobiDBLite consensus disorder prediction 353 381 - -
Glsi08g0433 587 MobiDBLite consensus disorder prediction 215 241 - -
Glsi08g0433 587 SUPERFAMILY WRKY DNA-binding domain 401 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0433 587 FunFam WRKY transcription factor 33 396 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0433 Glsi-ChrGlsi08 3644862 3647611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0433 65 586 WRKY Transcription Factor Family AT2G38470 46.555 7.25e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi08g0433 WRKY 1.6e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0433 08 3644862 3647611 Glsi08g0433 08 3644862 3647611 ECH