Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0425 ATGGAGACGGTGACCGTCAAGGCCACCGATCATATAGTCATAGAAATTGATTCTGCAAACAACAGTACTGGGTTCCAAACAGATTATAGCACTCACCGCCGCCAATTACAGTCATCACGCAAAACCTTAGAATCAGATGATGGGTACGATTGGATAAAATATGAGCGAAAACAAGTGAAAGGAAGTGAAAATTCAAGAAGCTGCTACAAATGCACATACCCCAGTTGCCCAACAAAGAAGACGGTCCAGAGGTCTATAAAGGGGCAGATCAATAAAATAGTTCACAAGGGCAAGCACAACCATCCCAAGCCTCATGCTACTAGGAGAAACTCATCATCTGCCTCCTCTCATGCAATTCCTGCTTCAAATGCTGTCAGAGCTGAAATCCCAGATGAATCATTTGCCACCCAGGACTACTCATCAATATCATCGGGAGATGAGGACTTTGAGCAGAGTTTCCAACCAGATGCCAAAAGATTGAAAATGGAAGTTGAAAATGAGGGAATATGGGCACATGGAAGAAAAACAGTGAGATATCCCAGAATTACAATACAGACAATCAGTGTCGTAGATGTTTTAGATGATGGGTACCTATGGAAGAGATACGGGAAGAAAGTAGTCAAGGGCAATCCAAATAAAAGTTCCTCTGCAGTTTGTAACTTGGCTTTCATATATAGTAATTATTTGCCCATGGGAGCCCAGATAGCTGTGCTGCCTCAGCCGTACAAGTTCTTGTCTCTCATCAACCTCTCCTTCGAATCCGCCGAAATCCCCCATCTGTGTGACATTCGTTCTTCTCCTGAGTTGGCCACCGATCATTTAGTTGTAGAAATTGAATCTGCAAACAACAATACTGGGTTCCAAACAGATTACAGCAGTTACCCCCACCAATCAGAGTCATTACGCAAAAGATCAGGTGATGGGTACAACTGGAGAAAATATGGGCAAAAACAAGTGAGAGAAAGTGAATATCCAACATGCTACTACAAATGCACATACCCCAATTGCCCAACAAGGAAGAAAGTTGAGAGGTCTTTAGATGGGCAGATCACTGAGATAGGTTACAAGGGCACCCATAACCATCCCAAGCCTCAGGCTACAGGGAGAAGCTTATCATCTGCCTCTTCTCGTGCACTTCCCCCTTCAAATGCAGTCATCGCTGAAATCCCAGATCAATCATTTGCCACCCACTGTAGTGGACAAATAAATTCGGTTGCAACACCGGATAACTCATCAATATCAATGGGAGATGATGACTTTGAGCAGAGTTCCCAGAAGAGTAAATCAGGAGGAGATGAGTTTGATGAAAATGAAACTGATGCCCGAAGATGGAAAATAGAAGGCGAAAATCAGGGTGCATCGGCACCTGGAAGTAGAACAGTAAGAGATCACAGAGTTGCAGTCCAGACAACCATTGACATGGATATTCTAGATGATGGGCACAGATGGAGGAAATATGGGCAGAAAGTAGTCAAGGGCAATCCCAATCCAAGGAGTTACTACAAATGCACACACCCAGGATGTCCGGTGAGAATGCACGCAGAGAGAGCCTCATATGACCTAAGGGTAGTGATCACAACCTACGAGGGAAAGCATAACCATGATGTCCCTGCACCCCGTGGCAGTGGCAGTGGTAGCCGTCCTGGGGAAAGGCCTCTGGCATTCGATTTCACTAACACCTAA 1683 0.448 METVTVKATDHIVIEIDSANNSTGFQTDYSTHRRQLQSSRKTLESDDGYDWIKYERKQVKGSENSRSCYKCTYPSCPTKKTVQRSIKGQINKIVHKGKHNHPKPHATRRNSSSASSHAIPASNAVRAEIPDESFATQDYSSISSGDEDFEQSFQPDAKRLKMEVENEGIWAHGRKTVRYPRITIQTISVVDVLDDGYLWKRYGKKVVKGNPNKSSSAVCNLAFIYSNYLPMGAQIAVLPQPYKFLSLINLSFESAEIPHLCDIRSSPELATDHLVVEIESANNNTGFQTDYSSYPHQSESLRKRSGDGYNWRKYGQKQVRESEYPTCYYKCTYPNCPTRKKVERSLDGQITEIGYKGTHNHPKPQATGRSLSSASSRALPPSNAVIAEIPDQSFATHCSGQINSVATPDNSSISMGDDDFEQSSQKSKSGGDEFDENETDARRWKIEGENQGASAPGSRTVRDHRVAVQTTIDMDILDDGHRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRMHAERASYDLRVVITTYEGKHNHDVPAPRGSGSGSRPGERPLAFDFTNT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0425 560 ProSiteProfiles WRKY domain profile. 46 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 MobiDBLite consensus disorder prediction 363 379 - -
Glsi08g0425 560 SUPERFAMILY WRKY DNA-binding domain 186 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 ProSiteProfiles WRKY domain profile. 188 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 288 543 IPR044810 GO:0003700
Glsi08g0425 560 Gene3D WRKY domain 30 105 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 Gene3D WRKY domain 291 365 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 FunFam WRKY transcription factor 296 365 - -
Glsi08g0425 560 MobiDBLite consensus disorder prediction 421 447 - -
Glsi08g0425 560 SUPERFAMILY WRKY DNA-binding domain 469 537 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 FunFam WRKY transcription factor 464 538 - -
Glsi08g0425 560 SUPERFAMILY WRKY DNA-binding domain 305 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 MobiDBLite consensus disorder prediction 401 420 - -
Glsi08g0425 560 MobiDBLite consensus disorder prediction 94 127 - -
Glsi08g0425 560 Gene3D WRKY domain 464 530 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 Gene3D WRKY domain 180 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 MobiDBLite consensus disorder prediction 353 379 - -
Glsi08g0425 560 MobiDBLite consensus disorder prediction 532 560 - -
Glsi08g0425 560 Pfam WRKY DNA -binding domain 46 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 Pfam WRKY DNA -binding domain 307 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 Pfam WRKY DNA -binding domain 478 534 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 ProSiteProfiles WRKY domain profile. 300 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 SMART WRKY_cls 477 536 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 SMART WRKY_cls 45 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 SMART WRKY_cls 305 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 SUPERFAMILY WRKY DNA-binding domain 42 104 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 ProSiteProfiles WRKY domain profile. 472 537 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0425 560 MobiDBLite consensus disorder prediction 401 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0425 Glsi-ChrGlsi08 3559067 3566345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0425 302 543 WRKY Transcription Factor Family AT2G38470 59.200 1.47e-88 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi08g0425 WRKY 2.5e-22 CL0274