Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0423 ATGGAGATTGGGACTGTTAGGCCCACCGATCATTTAGCTGTAGAAATTGATTCTGCAAACAACAGTACTTGGCTCCAAACAGATTACAGCAGTTATCCCCACCAATCACAGTCATTACGCAAAAGATCAGGTGATGGGTACAACTGGAGAAAATATGGGCCAAAACATGGGAAAGGAACTGAATATCCAAGAAGCTACTACAGTTGCACGTACCCCAGTTGCCCGGCAAAGAAGCTGTTTGAGAGATCTTCCGATGGGCAGATCAGTGATATAGTTTACGTGGGCACCCATAACCATCCCAAGCCTCAGGCTAGCAGGAGAAACTCATTATCTGCCTCTTCTCATGTACTTCCTCCTTCAAATGCAGTCAGCGCTGAAATGCCAGATCAATCATTTGCCACCCACGGCAGTGGACAAATTGATTCGGTTGCAACACCTGAGGACTCATCAATACCAACGGGAGATGATGACTTTGAGCAGAATTCCAAGAAGAGTAAATCAGAAGGAGATGAGTTTGATGAAAAAGAAACTGATGCCAAAAGATGGAAAATGAAAGGCGAAAATGAGGTTGTATCGGCACCCGGAAGTAGAATAGCGAGAGAACCCGCAGTTGTCTTGCAGACAACCAGTGACACAGATATTCTAGATGATGGGTACAGATGGAGGAAATATAAGCAGAAAATAGTCAAGGGCAATCCAAATCCAAGGAGTTACTACAAATGCACACACCCAGGATGTCCGGTGAGAAAACACGTAGAGAGAGCCTCTGATGACCCAAGGGTAGTGACCACAACCTACACGGGAAGGCATAACCATGATGTCCCTGCACCCCGCGACAGTGGTAGACTGTCTGGGAAAGGACCTCTCGTATTCGATTTCACATACACCCCCAATGCAGCCACTGCTGCCATAAGGCCCTCGGCAATTGAAACGATCAACACCTGGAAGGAAGAACATAGAAGGAGGGCAGAGGACGAAAGTGTATTCGGGAAGCAATGA 999 0.4675 MEIGTVRPTDHLAVEIDSANNSTWLQTDYSSYPHQSQSLRKRSGDGYNWRKYGPKHGKGTEYPRSYYSCTYPSCPAKKLFERSSDGQISDIVYVGTHNHPKPQASRRNSLSASSHVLPPSNAVSAEMPDQSFATHGSGQIDSVATPEDSSIPTGDDDFEQNSKKSKSEGDEFDEKETDAKRWKMKGENEVVSAPGSRIAREPAVVLQTTSDTDILDDGYRWRKYKQKIVKGNPNPRSYYKCTHPGCPVRKHVERASDDPRVVTTTYTGRHNHDVPAPRDSGRLSGKGPLVFDFTYTPNAATAAIRPSAIETINTWKEEHRRRAEDESVFGKQ 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0423 332 MobiDBLite consensus disorder prediction 101 149 - -
Glsi08g0423 332 ProSiteProfiles WRKY domain profile. 210 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 Pfam WRKY DNA -binding domain 45 100 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 Pfam WRKY DNA -binding domain 216 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 MobiDBLite consensus disorder prediction 95 188 - -
Glsi08g0423 332 FunFam WRKY transcription factor 34 103 - -
Glsi08g0423 332 Gene3D WRKY domain 29 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 Gene3D WRKY domain 199 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 SUPERFAMILY WRKY DNA-binding domain 42 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 297 IPR044810 GO:0003700
Glsi08g0423 332 SMART WRKY_cls 43 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 SMART WRKY_cls 215 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 ProSiteProfiles WRKY domain profile. 38 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 MobiDBLite consensus disorder prediction 157 187 - -
Glsi08g0423 332 SUPERFAMILY WRKY DNA-binding domain 207 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g0423 332 FunFam WRKY transcription factor 57 201 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0423 Glsi-ChrGlsi08 3553275 3554618 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0423 40 309 WRKY Transcription Factor Family AT2G38470 52.518 5.96e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi08g0423 WRKY 4e-25 CL0274