Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0419 ATGATTACGACGTCCGTTCCAATTCGAAATTTGCTGATGCATCCTAAGTTATGGAGGGTGACTGAACATGTAGCCGTAGAAATTGATTTTGCAAATAGAGTAGAGGAAGGAGCTGAGGGTGGCCGCCAGAATGAATTTTATAGCACTCTGGGGATTGACCAAGTGAGAGAAGAAAGATTTCTATTTCCACTAGACATTGAAGCTAAACTTAAGGACGCAATGGCTTCTGGGTTTGCTAAGGAAAGTTGTCATATCTACATCAGTTGGCGAAGACAATTCTTCGATAAAAAGCTGTCGAAAATCCAGTTACATAAGCTGAACATCGACAAGATCTACAAGGTGCCACTGACCGTCCTCGACAACAAGATTCAACGTTGGATCATGGCTTCCAACTACGTTCTTAGGACACTACTTCCGGATGAACGGAACCTATGCAATCGCGTCTTCTCTGGATTCCCTCCTTATGGTGATCTCTGTTTCGTAGAGGCATGTCAAAGGCCCGTGGCTCAACTACTGAATTTTGCGGATGCCATCGCCGCCGGGAACGGTTCACCGGAGCTTTGGTTCAGAATCCTCAGTGTGTTTGAGACAATGAGAGACCTATTATCGGACTTTGATTCATTATTCTCCGACCAGTACTCAGTGGTTCTGAGAGATAGGGCCATCACAATCTGGAAAAGGTTAGGGGGAGTCATCAAAGGCGCTTTCGTGGACCTGGAGAATCTGATTCGTCAGGACCCAGGAAACGTGGTTGTTCCCAATGGGGGGCTTCATCCTATAACCCACTATGTTATGAACTACCTTCATATGGCATGTGCATCCTGGCGAACCATTGACCGTATATTCAAAGACAGCGAAAATGGAAATTCATCGCCTTCTCCACTTTCCCTCCAAATGATTCGGATTATGGAGTTATTAAACAGTTATTTGAAGACAAACGCGGAAACGTACAAGGACTCTGCTTTGTTCTCTGTTTTCATGATGAACAATACGAGGTACATCGTTCATAATGCAAATCGCAGTAAACTTGGGCTGCAGTTAGGTGAAAAGTGGATACGAGAACACACTGAAAAGGTTCAGAAATACCTTGTACGCTACAATAGAAGTTCATGGGGTAAGGTACATGACATCTTGACTCTTAAAAATAAGTCCCCGACACATGATGCATCTCCAGAATGGTTCAAACTGCTTATGTTGAAATTTGAGGGGATATGCGAGGTGCAATCGAAATGGGTTATATTCGATAAGCAGCTGAGAGAAAAGGTTAGAAGTTCCTCGAAGAGAATCTTGTTGGCAGCATACGCAAAATTCGTGGCAAGATTCCAGGATGTTGTGGAAACTGGGATGGAAGAAGTTATTGTTGCTGGAATAAACAAGTTGTTTGAGGGCAGAGATGAGCTCAGAAACTTGAGACACATTCAACCAACATGGACCGTAGTGACACCCACTACCGGAGATTTTTATGAATGGACCATGTATGGAGAGGAGATAGTTCTTAATTCTGCACGCCACAGAACTGTTAAGATTCCAGTTGGGACGACTAGTGACACTGGACATGTAGCCTTAGAAATTGTTACTGCAAATGGAGTAGAAGAAGGAGCTAACAGTAACTGCGAGAAAGAAATTTATACCATTCTGGGGATTGAGCAAGTTAAAGAAGAGAAAGCTCTATTTCCTCCAGACACTGAAACTAAACTTAAGGACGCAATGGCTGCTAAGGAAAGCTGCAATATCTACATTAGTTGGCGAAGACAGTTCTTGGATGAAAAGCTGTGGAAAATCCGGTTACATAAGCTGAACTTCGAGGAGATCAACAAGGTGCCACTAAACTACGTCGAAAACAAGATTCATCGTTGGATCATGGCTTCCAACTACGTTCTTAGGACACTACTTCCGGATGAACGGAACCTCTGCAATCGCGTGTTCTCTGGATTCCCTCCTTATGGTGATGTCTGTTTCATAGAGGCATGTCAAAGACCCGTGATTCAAATACTGAATTTTGCGGATGCCATCGCTGCCGAGAACCGAGCGTTTGTTCAGAATCCTCATTTAAAAAGAGCCATCGCAATCTGGAGTGTTAAGGGAGGCAATCAAAGGAATTTTATGGACCTGAAGAATCTGTTTGGTCAGAGCCCAGGAAAGGTGGTTATTCCCAATGGGGGGCTTCATCCCATAACTCACTATGTAATGAACTACCTTGATATCGCATGTGAATCTTGGCGAATCCTTGATCGTGTATACAAAGACAGCGAAAACAGAGATTCATCGGCTTCTCCATTTTCCTCCCAGGTCGCTCGGATTATGGAGTTGTTAACAGGTACCTTGGAGACAATCTCCAAAACGTACAAGGACTCTGCTTTGTGCTCTGTTTTCATTATGAACAATACGAGGTACATTGTTCATAATGCATGTCGCAGTGCAGTTGGGAAGCTGTTGGGTGAAGAGTGGATCCGAGAACACATTGCAAAGGTGCAATCGAAATGGGTTATCTTTGATGAGAAGCTGAGAGAAAAGGCAAGAAGTTCCTCCCAGAAAACTTTGTTGGCGGCATATGTAAAATTCATGGCAAGATTCCATGATATTGTGGGAACTGGGATGGAAGAAGATATTGCGGCTGGGATAAACAAGTTGTTCAAGGGCAGAGATGAGCTCAAAAGTTGGAGGTGCTGGAGTTTTTCAAGGATCTGCTCAGGTAAATTTGATCACATGCCTCTCATCTGA 2721 0.4373 MITTSVPIRNLLMHPKLWRVTEHVAVEIDFANRVEEGAEGGRQNEFYSTLGIDQVREERFLFPLDIEAKLKDAMASGFAKESCHIYISWRRQFFDKKLSKIQLHKLNIDKIYKVPLTVLDNKIQRWIMASNYVLRTLLPDERNLCNRVFSGFPPYGDLCFVEACQRPVAQLLNFADAIAAGNGSPELWFRILSVFETMRDLLSDFDSLFSDQYSVVLRDRAITIWKRLGGVIKGAFVDLENLIRQDPGNVVVPNGGLHPITHYVMNYLHMACASWRTIDRIFKDSENGNSSPSPLSLQMIRIMELLNSYLKTNAETYKDSALFSVFMMNNTRYIVHNANRSKLGLQLGEKWIREHTEKVQKYLVRYNRSSWGKVHDILTLKNKSPTHDASPEWFKLLMLKFEGICEVQSKWVIFDKQLREKVRSSSKRILLAAYAKFVARFQDVVETGMEEVIVAGINKLFEGRDELRNLRHIQPTWTVVTPTTGDFYEWTMYGEEIVLNSARHRTVKIPVGTTSDTGHVALEIVTANGVEEGANSNCEKEIYTILGIEQVKEEKALFPPDTETKLKDAMAAKESCNIYISWRRQFLDEKLWKIRLHKLNFEEINKVPLNYVENKIHRWIMASNYVLRTLLPDERNLCNRVFSGFPPYGDVCFIEACQRPVIQILNFADAIAAENRAFVQNPHLKRAIAIWSVKGGNQRNFMDLKNLFGQSPGKVVIPNGGLHPITHYVMNYLDIACESWRILDRVYKDSENRDSSASPFSSQVARIMELLTGTLETISKTYKDSALCSVFIMNNTRYIVHNACRSAVGKLLGEEWIREHIAKVQSKWVIFDEKLREKARSSSQKTLLAAYVKFMARFHDIVGTGMEEDIAAGINKLFKGRDELKSWRCWSFSRICSGKFDHMPLI 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0419 906 PANTHER EXOCYST COMPLEX PROTEIN EXO70 557 674 IPR004140 GO:0000145|GO:0006887
Glsi08g0419 906 SUPERFAMILY Cullin repeat-like 75 444 IPR016159 -
Glsi08g0419 906 Gene3D Exocyst complex component Exo70 27 469 - -
Glsi08g0419 906 Gene3D Exocyst complex component Exo70 823 886 - -
Glsi08g0419 906 Gene3D Exocyst complex component Exo70 511 822 - -
Glsi08g0419 906 Pfam Exo70 exocyst complex subunit 699 825 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi08g0419 906 Pfam Exo70 exocyst complex subunit 618 674 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi08g0419 906 Pfam Exo70 exocyst complex subunit 124 445 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi08g0419 906 SUPERFAMILY Cullin repeat-like 527 878 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0419 Glsi-ChrGlsi08 3536177 3542854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0419 572 880 EXO70 exocyst subunit family AT5G58430 37.093 1.40e-65 230