Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0414 ATGGAGAGGCTATGGTATGCTGCTTCAGTACTGTATATCCATTTAATTCTGTACCCTGACACTTGGCGGCTAAAGTTCAGCTGCACCGTATTGAATGGCTCTGAATTTCTGATCAACCCCAGAACATTTAAGCAGATATTCATTCTGATGGGCCCGGCGGGGGTTAGGAGTGTGGATTCGTCAAATCTTTCAATGGGGTCTGATGTTGATTACTCGGCCCTGCAATTTGGATGGAGTTTTATATTCTGGGGTTTCATGTTTGTGGGCCTTTTTGGGCCTTCTTCCCTAACACCTCCATTACTCTATGAAAAGACTTTCCGAGGGTACCGTTTGCCACCACAAGAACTCAATGGATGGCAGTGGCACTTTCATCATCCTCATTCTCGGATCCTGCTAGACAACTCTACAATGGAAGCTAACTTTGAGTCTGTGATGCTTCCCATAACTTGTCGGCATATACCTGAGGTTCCAACTTCTGGCATCTTTTTTGGAGAAAACCCTTTGAATTGCACCTTTTCTCTCATACTGTTCGAGTTCTCTCTCGTTGTCCTCATCACTCGCATTATTCGTTTCCTTCTTATGCCCCTCAAACAACCTAGGATCGTCTCTGAGATCATCGGTGGCATCGTTGTTGGACCCTCAGTTTTGAGACGCAACAGATGGTTTACAAGCAATATAGTTCATGGGAATGCCGATTTTCTGGTCAGCAATATTGGAATTATGGGTTTCATGTTCTTTCTTTTCGTGTACGGAGTGAAGACGGACACAGGCCTTGTGAAAAAAACGGGGAAAAAACATATATGCACAGCTTTGATTGGTATTATCGTACCCACAATAGCAGCTTTTGTTATGGCATTGAGCATGAGAAAGAACATGGACAAAGAGCTTGCTAAAATATCTTCAATAGGAGGAATTGCAGGCTACATGGGACTCTCATCATGTCCTGTCCTTTACGGTATCCTGAAAGAACTCAACCTTCTAAGCTCAGACGTAGGACGAACGGCGTTATCCACAGCACTAATTGGTGATGTACTAGGCATGGGTATAATTGTGGTATTTGAGGCAGGGAAGCAAGGAGAATCAGGGCCTAAGAATGCCTTGTGGTATTTGATTTCTTTGGTGTTTTTGGTGGCATTTGTTCTGGTATGTATCAGGCGAGCAATGAAATGGATTATTGATAAAACCCCACAAGGGAAACCAGTTGATGGGTCTTACGTTGTTGCCATTCTCTTGGGGGTTTTTTTGATGGGGTTTGTGACTGACATGTTTGGCATAGCCATTGCTAACGGGCCATTATGGTTAGGGCTGGTGATTCCAGATGGTCCTCCTTTGGGTACAACAATTGTGGAGAAGACTGAGACAATTATGATGGAATTTCTTATGCCATTCGCATTCATTCTGATAGGACTTCATACTGATGTGTTTGCCATGAGCGCTGTTGGTTGGTCCAATTTGGCGCCATTGTTTCTCATGGCTTTAGTTGGCTACACGACCAAGTTTCTTTCTACCTGGGTTACTACTATCTATTGGCGGATGCCCTTCAGGGATGGACTAACCCTCAGCCTCATCATGAGCTTAAGAGGCCAAGTTGAACTTATATTGTTTGTTCATTGGATGGACAAAAAGATGATAAAGCCGCCAGGTTTCACAATATTGGTGCTCATGACAGTGGCATTAACTGCGACACTTACTCCTTTGATCTGCATAATCTATGATCCAACAAAGCCATACATGGTGAACAAAAGGAGAACCATCCAACACACTCCTCCAAACACAGAACTTCGAATAGTGCTTTCCATTCTCGACAGAGAAAGCATAAGTGGCCTCGTCCATCTTCTCGAACTCTCCCCTCCTACCTCAACCAACCCCCTTTCCATACTTGCTCTTCATCTAATGGAGCTCGTTGGCCGAACTAGCCCCGTTTTCATAGACCACGAGCAACAAGACGTGCCTCCCAAATACAAATGCATGCACATCATAAACACCCTCAAGAACTACCAAGAACATCGAGCTGAATTTGTGAAGCTCCATTTATTCACAGCCGTGACCTCAAAGCGAACTATGTACCAAGACATCTGTGAGGTTGCCTTAGAGCACAAAGCTGCTTTGATTGTCTTACCCTTTTGTAGGGGAGCTGTTCATAACCGTCAAGGAACTCCAGTAATGGGCGATGGAGCTCGAACTGTGAATTCTCATGTTTTGACTCATGCACCTTGTTCTGTGGGGATTTTTGTTGACAAGAGTAATATTGGAAACCCATTCATGGGTGGCTCAAGAAACAAACTTGCTGTGCTATTTATGGGAGGGGCAGATTCTAGAGAGGCTCTTGTTTATGCAGATAGAATGGCTGATAATGAGGAGGTGAAGCTGACTGTGATACGGTTTCTTTCTTTCAATTGTGAAGGGGACACTGAGGTGGAGAAGAAGCTTGATGATGGAACTGTGACTTGGTTCTGGGTTAAGAATGAGTTGAATGAGAGAGTGGAGTACAGAGAGGTGGTGGTTGAGAATGGAGAAGGAACAGTCAGGGCAATTCAGGCTATGAATGATGGCACTTATGATCTTTGGATAGTGGGAAGAAGACAGGGAATTAACCCTGTTCTTCTAACTGGGTTATCAAATTGGAGTGAGAATGAAGAATTGGGACTCATAGGAGACTATGTTGCATCTGTAGATTTTAGTGATTCAGCTTCAGTTTTAGTGGTGCAACAACAAATTCTCAGAGGATGA 2730 0.4399 MERLWYAASVLYIHLILYPDTWRLKFSCTVLNGSEFLINPRTFKQIFILMGPAGVRSVDSSNLSMGSDVDYSALQFGWSFIFWGFMFVGLFGPSSLTPPLLYEKTFRGYRLPPQELNGWQWHFHHPHSRILLDNSTMEANFESVMLPITCRHIPEVPTSGIFFGENPLNCTFSLILFEFSLVVLITRIIRFLLMPLKQPRIVSEIIGGIVVGPSVLRRNRWFTSNIVHGNADFLVSNIGIMGFMFFLFVYGVKTDTGLVKKTGKKHICTALIGIIVPTIAAFVMALSMRKNMDKELAKISSIGGIAGYMGLSSCPVLYGILKELNLLSSDVGRTALSTALIGDVLGMGIIVVFEAGKQGESGPKNALWYLISLVFLVAFVLVCIRRAMKWIIDKTPQGKPVDGSYVVAILLGVFLMGFVTDMFGIAIANGPLWLGLVIPDGPPLGTTIVEKTETIMMEFLMPFAFILIGLHTDVFAMSAVGWSNLAPLFLMALVGYTTKFLSTWVTTIYWRMPFRDGLTLSLIMSLRGQVELILFVHWMDKKMIKPPGFTILVLMTVALTATLTPLICIIYDPTKPYMVNKRRTIQHTPPNTELRIVLSILDRESISGLVHLLELSPPTSTNPLSILALHLMELVGRTSPVFIDHEQQDVPPKYKCMHIINTLKNYQEHRAEFVKLHLFTAVTSKRTMYQDICEVALEHKAALIVLPFCRGAVHNRQGTPVMGDGARTVNSHVLTHAPCSVGIFVDKSNIGNPFMGGSRNKLAVLFMGGADSREALVYADRMADNEEVKLTVIRFLSFNCEGDTEVEKKLDDGTVTWFWVKNELNERVEYREVVVENGEGTVRAIQAMNDGTYDLWIVGRRQGINPVLLTGLSNWSENEELGLIGDYVASVDFSDSASVLVVQQQILRG 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0414 909 FunFam Cation/H(+) antiporter 24 173 578 - -
Glsi08g0414 909 PANTHER CATION/H + ANTIPORTER 144 905 - -
Glsi08g0414 909 Gene3D - 626 875 - -
Glsi08g0414 909 Pfam Sodium/hydrogen exchanger family 181 566 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi08g0414 909 Gene3D - 173 574 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0414 Glsi-ChrGlsi08 3514751 3518972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0414 143 906 Antiporter Super Family AT5G37060 46.608 0.0 736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0414 08 3514751 3518972 Glsi08g0414 08 3514751 3518972 ECH