Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0413 ATGGCGACAGACGTAACGGCCGAATTGCCAAACCCCGACTTTTGCCCTGTTCCGCAGCAGCCAGATTTCCATCAAGAGCTCACTGAGTCACCTCACGATGGCCTCCATTTTTGGCAGTTCATGATCGCCGGTTCCGTCGCCGGCTGCGTTGAGCACATGGCAATGTTCCCTGTGGACACTGTGAAGACCCATATGCAAGCTCTCGGGTCATGCCCGATTAAGTCAGTTAGTGTTCGGCAAGCCCTTAAATCGATTCTGAAATCTGAGGGTCCATCTGCACTATACCGTGGCATAGGCGCAATGGGTCTAGGTGCTGGACCAGCACACGCTGTGTATTTCTCCATTTATGAGACGTGTAAGAAGTATTTATCTCATGGGGATCCCAAAAATTCCATTGCCCATGCGATTTCAGGTGTGTGCGCTACCGTTGCGAGCGATGCTGTGTTTACGCCTATGGATATGGTGAAGCAGAGATTGCAGTTGAGTAGTAGTGGTTACAAGGGTGTTTGGGACTGTGTAAAGAGGGTATTAAGGGAGGAGGGGTTAGGGGCATTTTATGCATCGTATAGGACTACAGTTTTGATGAATGCACCTTTTACAGCAGTGCATTTTGCAACTTATGAGGCTGCAAAAAGAGGCCTAATGGAGATTTCGCCCCGGAGTGCTGATGATGAACGTTTGGTTGTCCATGCAACAGCTGGAGCTGCTGCTGGTGCCTTGGCTGCTGCCGTTACGACACCACTTGATGTGGTTAAAACTCAATTGCAGTGTCAGGGAATTTGCGGATGTGATAGATTTAAAAGTGGTTCAATTGGGGATGTTATTAAAACAATAGTGAAAAAGGATGGATACAGAGGGCTCATGCGAGGATGGATTCCAAGGATGCTCTTCCATGCTCCTGCGGCTGCAATCTGCTGGTCCACATATGAAGGTGGAAAGACCTTTTTCCAAGAGTTCAATCAAAGTAAAGACAGTGGCACTGTCTATTAG 990 0.4828 MATDVTAELPNPDFCPVPQQPDFHQELTESPHDGLHFWQFMIAGSVAGCVEHMAMFPVDTVKTHMQALGSCPIKSVSVRQALKSILKSEGPSALYRGIGAMGLGAGPAHAVYFSIYETCKKYLSHGDPKNSIAHAISGVCATVASDAVFTPMDMVKQRLQLSSSGYKGVWDCVKRVLREEGLGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEISPRSADDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGICGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEGGKTFFQEFNQSKDSGTVY 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0413 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Glsi08g0413 329 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Glsi08g0413 329 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Glsi08g0413 329 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Glsi08g0413 329 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Glsi08g0413 329 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Glsi08g0413 329 PANTHER MITOFERRIN-1-RELATED 28 319 - -
Glsi08g0413 329 Pfam Mitochondrial carrier protein 226 318 IPR018108 -
Glsi08g0413 329 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Glsi08g0413 329 Pfam Mitochondrial carrier protein 35 124 IPR018108 -
Glsi08g0413 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Glsi08g0413 329 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Glsi08g0413 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Glsi08g0413 329 Gene3D Mitochondrial carrier domain 193 329 IPR023395 -
Glsi08g0413 329 Gene3D Mitochondrial carrier domain 20 192 IPR023395 -
Glsi08g0413 329 FunFam Mitochondrial carrier protein, expressed 130 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0413 Glsi-ChrGlsi08 3495651 3497641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0413 1 325 Chloroplast and Mitochondria Gene Families AT1G07030 75.000 2.16e-176 489