Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0401 ATGTCGAAGGTTGTCTGTGTCACCGGAGCCAGCGGAGCCATTGGGTCATGGCTGGTCCGCCTCCTCCTCGACCGCGGCTACACCGTGCACGCCACCGTCCAAGATCTCAAGGATGAGAACGAGACCAAGCATTTGGAGGCACTGGAGGGAGCTAAGACTCGTCTTCGTTTGTTCGAGATGGATCTTCTTGACGACGCCTCCATCGCCGCCGCTATAAAGGGCTGTGCCGGCGTGTTCCACCTTGCCTGCCCCAACATCATCGGTCAAGTACAAGATCCCGAGAAACAAATAATGGAACCGGCGATTAAAGGGACGGTGAACGTACTGAAGGCGGCAAAGGAAGCAGGGGTGGAGAGAGTGGTGGCGACGTCGTCAATCTCGTCTATTATTCCGAGCCCTAACTGGCCTGCCGACAAGATTAAAACAGAGGAGTGCTGGACCGACCTTGACTACTGCAAGAGAAAGGGACTGTATTACCCGATGGCGAAAACGCTAGCGGAGAAAGCTGGATGGGATTTTGTGAAGGAGACGGGCTACGACGTGGTGATGATAAATCCAGGGACAGCCTTGGGCCCTCTGATTCCGCCCAGACTGAATTCAAGCATGGCCGTGCTCGTTGGCGTCCTGAAAGGCGCCACCGAGACCTACGAGGATTTCTTCATGGGAATGGCCCACTTTAAGGATGTAGCCACTGCTCATATTTTGGCCTTCGAGAACAAACACGCTTCTGGACGGCACTTGTGTGTCGAAGCGATTCGTCACTACGGTGATTTTGTCGCCAAGGTTGCCGAACTCTACCCTGAATATAATGTCGCTAGGCTGCCAAAGGATACTCAACCTGGGTTGTTGAGAGCAAAGGATGCATCTAAGAAGTTGATGGATATGGGTCTGGAGTTCACACCTATGGAGCAAATTATCAAGGATGCAGTAGAAAGTTTGAAGAGCCATGGATTTATCTAA 960 0.525 MSKVVCVTGASGAIGSWLVRLLLDRGYTVHATVQDLKDENETKHLEALEGAKTRLRLFEMDLLDDASIAAAIKGCAGVFHLACPNIIGQVQDPEKQIMEPAIKGTVNVLKAAKEAGVERVVATSSISSIIPSPNWPADKIKTEECWTDLDYCKRKGLYYPMAKTLAEKAGWDFVKETGYDVVMINPGTALGPLIPPRLNSSMAVLVGVLKGATETYEDFFMGMAHFKDVATAHILAFENKHASGRHLCVEAIRHYGDFVAKVAELYPEYNVARLPKDTQPGLLRAKDASKKLMDMGLEFTPMEQIIKDAVESLKSHGFI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0401 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Glsi08g0401 319 CDD FR_SDR_e 5 297 - -
Glsi08g0401 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
Glsi08g0401 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
Glsi08g0401 319 Pfam NAD dependent epimerase/dehydratase family 5 241 IPR001509 -
Glsi08g0401 319 Gene3D - 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0401 Glsi-ChrGlsi08 3438342 3439898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0401 3 319 Monolignol Biosynthesis Gene Families AT5G58490 69.716 1.04e-173 482