Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0398 ATGGGGGGTTCTTCACCTTGTGCCTCCTGCAAACTGTTACGACGCCGTTGCTCCAAAGACTGCATCTTTGCTCCTTACTTTCCTTCTGATAATCTTTACAAGTTTGCCATTGTGCACAAGGTCTTTGGTGCTAGCAATGTCAGCAAAATGTTGCAGGATCTTCCAGTTCATCAAAGAGAAGATGCAGTGAGCAGTTTAGTTTACGAGGCAAACGCGAGAGTGAGAGACCCGGTGTATGGATGTGCTGGAGCCATATCTCACCTACAAAGCCAAGTTTCACTACTGGAAATGCAACTTGCGGAGGTTAAGGCAGAGATTGTTTGCTTCAAGAATCAGCAAGAGCCTAACTTACACACCCTCATACATCAAGATGACAAACTACTTCTATCAGATAATAATTATTACGAAAGCATTCCCCAGTACCTCTGCTTTCCTTCTTCTTCTTCCCGAAGACCCTCTTAA 462 0.4437 MGGSSPCASCKLLRRRCSKDCIFAPYFPSDNLYKFAIVHKVFGASNVSKMLQDLPVHQREDAVSSLVYEANARVRDPVYGCAGAISHLQSQVSLLEMQLAEVKAEIVCFKNQQEPNLHTLIHQDDKLLLSDNNYYESIPQYLCFPSSSSRRPS 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0398 153 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Glsi08g0398 153 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 118 - -
Glsi08g0398 153 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Glsi08g0398 153 Coils Coil 85 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0398 Glsi-ChrGlsi08 3422371 3423249 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0398 3 129 AS2 family AT2G30130 73.485 1.05e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi08g0398 LOB 3.3e-41 No_clan