Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0384 ATGGCTGCTGCCTTGGAGTGTTGGTCGAGCCGGGCGAGCACGGACGAGGACATGGTAGAACAGGTTCTGATGAGGACCCAAGATAGATCCGAGGGCCTGACGCCGGAGAGCTCCTCCGGCGGTGGAGCCAAGGAATCGTCCCTGATGCAGAAGAAATTGCAGAAGCTGAGCCGGAACGTCTCCGAGGCTATTGCCTCGCTAAAGAACTCACTCAATCTGGATTCTACTCGCGACCCACCTTCCAAGGTTGATAATTCTCAAAAAGTTGTGTGGGGAAGTGTTGTACGGAATCTCACACAGCTCTATCCTGGTAGTCAGCTTCCAGAGAAGCTCATGTCCAACATTCGCAGGCATTACGATTCGTTGCCTCTCAGTTATGCTCAGGCGGAATTCGATATGAAGGATGTATTTCTTCACATCAAGTTGATAGAGCAAGCATCAGCAGATGATCAGCCTGCAATTTTAATTCAAGAAGAGTCTGATAGTGAAATTCAGGGATCTGTATTCAAGCTAACATTTGTCTGTAACTCTCCAATTTCATGGCCAGCAATGTCCAGTGCACTTGATGGTTCATCTATTTGCTGCAAGAAGATACAGATCTTTGAGAAAAAAGGTTTTACCCTTGGAATTGTACTTCTTATTGTTCAATCTGGGCATGATAGATTGGTCAGAACCCGAGTTGAAAGTGCCCTAAAATTTGCTATGAAAAAACCCAAAACTAGTGCAGTGAAGCTCCCCTTTGGGCTCTGTGGATGTCAAGAGGAGAACTCCAAGCGGAGAGAACTCGGGGAGATTGAAGAAGACAGTGGTGATACATATTACGGAAACGGGTTTGAGAATTCGAGCCAGAGGGTTCAGCTTCAGATGCCCTTACCCTCCTCTTCTTTTCTTATATCCGTAGATGAATGGCAGACGATTCAGTCAGGTGGGGATGAGATAGAAAAATGGCTGTTGAACTCAGATAGTCTTGATTTTACAGAACAAATTGGACCCAATTCATTTAAGGGGGTCTACATGGGGAAAAAGGTTGGAATTGAGAAGCTTAAGGGATGTGACAAAGGCAATTCTTACGAGTTTGAGCTTCGTAAAGATCTGCTTGAACTGATGACTTGTGGCCACAAAAACATTCTGCAGCTCTGCGGTGTTTGTGTAGATGAGAATCATGGGTTATGCGTGGTGACGAAGTTCATGGAAGGTGGGTCAGTTCATGACTTACTGTTAAAGAACAAGAAGCTTCAGACTAAGGAAATCATAAGAATCGTAGTTGATGTAGCTGAAGGGATGAAATTTATCAATGATCACGGGGTTGCATACAGAGACCTCAATTCACAGAGGATTCTATTGGATCGACATGGGAATGCTTGCCTCGGAGATATGGGTATAGTCACTGCGTGCAAGAGTGTTGGAGAGGCAATGGAGTACGAGACTGACGGTTATCGGTGGCTAGCTCCAGAGATAATTGCAGGTGACCCAGAGAGCGTGACAGAGACATGGATGAGCAATGTTTACAGTTTTGGTATGGTAATTTGGGAGATGATTACTGGTGAGGCAGCCTATGCAGCTTATTCGCCTGTGCAGGCAGCAGTGGGAATTGCTGCTTGTGGCCTCAGACCTGAGATTCCCAAGGACTGCCCACAAACTCTAAAATCTCTTATGACCAAGTGCTGGAACAACACCCCTTCAAAACGCCCTCACTTCTCCGAAATTTTATCCTTCTTACTGCGACCAAACAACAACAATAGGTAA 1746 0.4576 MAAALECWSSRASTDEDMVEQVLMRTQDRSEGLTPESSSGGGAKESSLMQKKLQKLSRNVSEAIASLKNSLNLDSTRDPPSKVDNSQKVVWGSVVRNLTQLYPGSQLPEKLMSNIRRHYDSLPLSYAQAEFDMKDVFLHIKLIEQASADDQPAILIQEESDSEIQGSVFKLTFVCNSPISWPAMSSALDGSSICCKKIQIFEKKGFTLGIVLLIVQSGHDRLVRTRVESALKFAMKKPKTSAVKLPFGLCGCQEENSKRRELGEIEEDSGDTYYGNGFENSSQRVQLQMPLPSSSFLISVDEWQTIQSGGDEIEKWLLNSDSLDFTEQIGPNSFKGVYMGKKVGIEKLKGCDKGNSYEFELRKDLLELMTCGHKNILQLCGVCVDENHGLCVVTKFMEGGSVHDLLLKNKKLQTKEIIRIVVDVAEGMKFINDHGVAYRDLNSQRILLDRHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMITGEAAYAAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPHFSEILSFLLRPNNNNR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0384 581 Gene3D Transferase(Phosphotransferase) domain 1 316 577 - -
Glsi08g0384 581 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 153 573 - -
Glsi08g0384 581 MobiDBLite consensus disorder prediction 27 52 - -
Glsi08g0384 581 SUPERFAMILY Protein kinase-like (PK-like) 301 573 IPR011009 -
Glsi08g0384 581 MobiDBLite consensus disorder prediction 24 52 - -
Glsi08g0384 581 PRINTS Tyrosine kinase catalytic domain signature 430 448 IPR001245 GO:0004672|GO:0006468
Glsi08g0384 581 PRINTS Tyrosine kinase catalytic domain signature 394 407 IPR001245 GO:0004672|GO:0006468
Glsi08g0384 581 PRINTS Tyrosine kinase catalytic domain signature 544 566 IPR001245 GO:0004672|GO:0006468
Glsi08g0384 581 PRINTS Tyrosine kinase catalytic domain signature 500 522 IPR001245 GO:0004672|GO:0006468
Glsi08g0384 581 ProSiteProfiles Protein kinase domain profile. 323 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0384 581 Pfam Protein tyrosine and serine/threonine kinase 357 573 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0384 Glsi-ChrGlsi08 3306964 3311241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0384 306 573 MAP Kinase Kinase Kinase AT2G17700 34.182 2.96e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Glsi08g0384 PK_Tyr_Ser-Thr 4.4e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0384 08 3306964 3311241 Glsi08g0384 08 3306964 3311241 ECH