Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0378 ATGGCAGCTGAACAGGGTGATAGGTCGTCTTCTGTTACCATACCCCTTCTGGGTGATGACAATCCTCATGACCAAGTGACTGGGGTGGCCAAAACTGGGGACCTACACCACCTTCCTCTTGGCAACACCTCCTTTTTCAAGACCTGTTTCCATGGGATTAATGCTATCTCAGGAATTGGCATAGTGTCCATTCCCTACGCACTAGCATCAGGAGGATGGTTAAGCATATCTCTGCTATTTATGATTGCCATTGCTTGTTATTACACTGGCATTCTGGTTCAAAGATGCATGGACATGGATCCTCACATCAGAACCTTCCCTGACATAGGCCAACGAGCATTTGGAGATAAAGGAAGACTAATGGTATCCATAGCCATGAACTCTGAGCTCTACCTAGTTGTCACAGGGTACCTCATTTTAGAAGGAGACAACTTGAACAAACTAATACCCAACGTGCAACTTCACATTGGAGGGTTAACAATTGGAGGAACAACCCTTTTTGCCCTACTTGCTGCCATTGTTATATTGCCTACTGTTTGGTTCGAGGACTTGAGCCTTCTCTCTTATGTCTCTGCAAGTGGTGCCCTGGCTTCGACCATCTTCCTCATCTCTTTATTGTGGAATGGGACAATTGATGGAACTGGGTTTAATGCGAAGGGAATTGTGTTCAGATGGAGTGGAATCCCCTCAGCACTCAGCTTATATGCCTTCTGTTATAGTGCCCATCCAGTCTTGCCCACCCTTTATACTTCTATGAGGAACAGAAGTCAGTTCTCCAGTGTGTTGTTGGTATGCTTTTCATTATGCACTCTTGGCTATGCAGCAGCAGCTATTTTGGGGTACCTAATGTTTGGACAAGAGGTAGAATCACAGGTGACATTGAACCTTCCAACAGGCAAATTGAGTTCACATGTGGCCATATACACCACCTTGGTCAATCCAATAGCCAAATACGCACTCATGCTCACACCAATCGTGAATGCCACAAAAAACATGCTTCCTTGTCACTACAACAAAAGGCTCACACACCTTTTTGTGAGTACCTCCTTGCTGATCAGCACTCTTATCGTAGCCGTTGCTGTTCCATTATTTGGATACCTAATGTCACTTGTTGGAGCATTGCTTAGTGTGTCAGCTTCAATTCTAGTACCATCAGTGTGCTACTTGAAGATCTCAGGAGCTTATAGGCGACTTGGTTCTGAAATGATCATCAACTATTCAATAATAGTGATGGGTCTTGCAATTGCTGCTGTAGGATCTTACACTTCTCTTGTGGAAATAATTGGCCATTTGTGA 1296 0.4437 MAAEQGDRSSSVTIPLLGDDNPHDQVTGVAKTGDLHHLPLGNTSFFKTCFHGINAISGIGIVSIPYALASGGWLSISLLFMIAIACYYTGILVQRCMDMDPHIRTFPDIGQRAFGDKGRLMVSIAMNSELYLVVTGYLILEGDNLNKLIPNVQLHIGGLTIGGTTLFALLAAIVILPTVWFEDLSLLSYVSASGALASTIFLISLLWNGTIDGTGFNAKGIVFRWSGIPSALSLYAFCYSAHPVLPTLYTSMRNRSQFSSVLLVCFSLCTLGYAAAAILGYLMFGQEVESQVTLNLPTGKLSSHVAIYTTLVNPIAKYALMLTPIVNATKNMLPCHYNKRLTHLFVSTSLLISTLIVAVAVPLFGYLMSLVGALLSVSASILVPSVCYLKISGAYRRLGSEMIINYSIIVMGLAIAAVGSYTSLVEIIGHL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0378 431 PANTHER OS05G0424000 PROTEIN-RELATED 50 420 - -
Glsi08g0378 431 Pfam Transmembrane amino acid transporter protein 42 423 IPR013057 -
Glsi08g0378 431 MobiDBLite consensus disorder prediction 1 20 - -
Glsi08g0378 431 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0378 Glsi-ChrGlsi08 3261805 3265413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0378 34 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 55.416 4.35e-161 458