Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0377 ATGATCTCTCGCGAGCGCTGTGCTGGCAGCAAATTTGCATTCAAGTTCTTCTCCATCACCACGGCTTCAATACTTGTTATTTTGCCCAGTGTCTGGTTGGAAAACCTTAGCCTTCTTTCCTATGTTTCTGCAACTGGGGCTTTAGCTTCTATTGTCTTCCTTTGGGCATTGTTGTGGAATGGTGCTATCGATGGAACGGGGTTTCATGGCAAAGGCAACCTTTCTGATTGGAAAGGAATCCCCTGCAGCTGTGTTGTTGTTATTGTGGCACTGGCTGCAATGTCTTTCTTTGGGTATCTCTTGGCATTAGAATTGGTTCATTTCTACGTATTTCGGCCTCAAGTCTTGTTCATCAATATGTTAGTTGAAGATTTCAGCCTCTCTTCACCTCAGAACAGAGAAGGTTGGGCGTTGTTGATGTTTAGAGACAGAGTAGTGAGAGACCCTTTTGAAGCTTTATCAAACTGGAATGAAGAAGACGGAGAGATTAGTCCATGTTCATGGTTCGGAGTTGAATGCTCCGACGGTAAAGTTGTAAGCATGAATTTGGAAGGCCTTTGTCTCGAAGGAACACTAGCACCTGAAATTGGGAAGCTGGCTCAATTAAAATCCATCAATTTGCGCAACAACTCTTTCTTCGGAGAGATTCCTAAGGACATATTCCAATTAGAGAAACTGGAAGTTCTTGACTTGGGATTTAACAACTTCAGTGGACCGTTTCCATTTGACCTGACCACCAATCCATCTCTCCCTACCCTTTTACTGGACAACAATGAGTATCTTACCAAATTAGCCCCAGAAGAGTATAAGCTCAAGATGGTTTCTGAATTTCATGAAAGAAAAGAGCAATTATGTAGTTTCTGGCACGTTGGCCAACATGGGGATATGGCATACAGGCGGCAGCTTCTTCAAAGAGCAAAAGCTACTAATAAACGAAGAAGAAGAAGTAATAGGGGTGATGACAAACAGTCTGTTTCACTATCACCATCATCTTTCTCTTCTTCATTACCACAAGATTCTAAGCCATTCTCACCATCAGAATCCCCCTCAAATTCACCATCTGCATCAACCCCATCACCATATTCGCCCTCCTCACCTTTAATCTCTCCAGAAGCTTCCCCTTCACCATCTCCTTCCGTTGGTTTTCTCTCTCCTTCACCAATGGTGGCACCAACTAGAGGCATATCAGTTCCAGCAAATCCACCTGCTTTTTTATCCAAACCACCAGAGTCCAATTGGATATCAGCGCCTTCCCCTGCTAATTCACTTTGGAACCAACTGAATACAAACAGTTCCAAGCCCCATGACACTGTCATAATTTGGTCCACAGCTGGGGGCGTATCCTTGCTGATTTTTGTGTCAGCCATTGCTTTTGCTTGCTTCCGGAACAGAAAGGTTGTAACCGTTAAACCTTGGGCAACAGGGTTAAGTGGGCAGCTCCAGAAAGCTTTTGTGACTGGAGTGCCAAATCTCAGACGAGCAGAACTTGAAGCAGCTTGTGAAGATTTCAGCAACATTATTGGTTCTCTCCCAGAAGGGACTGTTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGCATCCACTGCAGGGACTTCATCACAAAACTGGTCAAAAAATATGGAAGCTCAATTCAGAAATAAGATAGAGACATTATCGAGAGTGAACCACAAGAACTTTGTGAATCTTATTGGGTATTGTGAAGAGAAGAAGCCATTCACAAGAATGATGGTTTTTGAGTATGCTCCAAATGGAACTCTCTTTGAGCATCTTCACATTAGAGAAGCGGAGCAGCTAGACTGGGGAATGAGAATGAGGATAGCAATGGGAATAGCCTATTGTCTAGAGCATATGCATCAGCTGAGGCCACCCATTGTCCACGGAAACCTGACATCTTCATCTATATACCTCACTGAAGACTATGCTGCTAAATTGTCAGATCTTAGTTTCTGGAATGACATGCCTGCTACGAAGAAAGTTTCTGCAACCACACAGCTCTTAGAAACTCCATCAGCAAATAAAAAAGGCAATGTTTATAGCTTTGGTGTTATACTGTTTGAATTGATAACAGGGAGAATTCCCTGTGCTGTGGACTATGGCTTTCTTGCAGATTGGGGGCAACCCTTGACAGATATGGTGGATCCAACTCTGAACTCTTTGCAAGCACAAGAGATTGAGAAATTGTCAGAAGTAATTAAAGATTGTGTTCGTTTAGATCCGGATAGAAGACCAACTATGAGAGAGGTTACAGCTAGGTTGAAGGATATCACTGCAATGGGGCCTGATGGAGCAACTCCAAAACTATCCCCTCTTTGGTGGGCAGAACTCGAAATTATGTCCACGGATTCAAGCTGA 2361 0.4346 MISRERCAGSKFAFKFFSITTASILVILPSVWLENLSLLSYVSATGALASIVFLWALLWNGAIDGTGFHGKGNLSDWKGIPCSCVVVIVALAAMSFFGYLLALELVHFYVFRPQVLFINMLVEDFSLSSPQNREGWALLMFRDRVVRDPFEALSNWNEEDGEISPCSWFGVECSDGKVVSMNLEGLCLEGTLAPEIGKLAQLKSINLRNNSFFGEIPKDIFQLEKLEVLDLGFNNFSGPFPFDLTTNPSLPTLLLDNNEYLTKLAPEEYKLKMVSEFHERKEQLCSFWHVGQHGDMAYRRQLLQRAKATNKRRRRSNRGDDKQSVSLSPSSFSSSLPQDSKPFSPSESPSNSPSASTPSPYSPSSPLISPEASPSPSPSVGFLSPSPMVAPTRGISVPANPPAFLSKPPESNWISAPSPANSLWNQLNTNSSKPHDTVIIWSTAGGVSLLIFVSAIAFACFRNRKVVTVKPWATGLSGQLQKAFVTGVPNLRRAELEAACEDFSNIIGSLPEGTVYKGTLSSGVEIAVASTAGTSSQNWSKNMEAQFRNKIETLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCLEHMHQLRPPIVHGNLTSSSIYLTEDYAAKLSDLSFWNDMPATKKVSATTQLLETPSANKKGNVYSFGVILFELITGRIPCAVDYGFLADWGQPLTDMVDPTLNSLQAQEIEKLSEVIKDCVRLDPDRRPTMREVTARLKDITAMGPDGATPKLSPLWWAELEIMSTDSS 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0377 786 Gene3D Phosphorylase Kinase; domain 1 477 583 - -
Glsi08g0377 786 Pfam Protein tyrosine and serine/threonine kinase 505 755 IPR001245 GO:0004672|GO:0006468
Glsi08g0377 786 MobiDBLite consensus disorder prediction 359 373 - -
Glsi08g0377 786 ProSiteProfiles Protein kinase domain profile. 501 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0377 786 FunFam Inactive receptor-like serine/threonine-protein kinase 475 583 - -
Glsi08g0377 786 SUPERFAMILY L domain-like 136 274 - -
Glsi08g0377 786 MobiDBLite consensus disorder prediction 306 385 - -
Glsi08g0377 786 Gene3D Ribonuclease Inhibitor 131 336 IPR032675 -
Glsi08g0377 786 Gene3D Transferase(Phosphotransferase) domain 1 585 762 - -
Glsi08g0377 786 Pfam Leucine rich repeat N-terminal domain 133 174 IPR013210 -
Glsi08g0377 786 SUPERFAMILY Protein kinase-like (PK-like) 486 755 IPR011009 -
Glsi08g0377 786 MobiDBLite consensus disorder prediction 322 358 - -
Glsi08g0377 786 PANTHER PROTEIN MALE DISCOVERER 2 115 783 - -
Glsi08g0377 786 FunFam Leucine-rich repeat receptor-like kinase 136 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0377 Glsi-ChrGlsi08 3250927 3260495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0377 495 751 Receptor kinase-like Gene Family AT3G19300 33.929 2.06e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Glsi08g0377 PK_Tyr_Ser-Thr 8.5e-26 CL0016