Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0375 ATGGAAAGTATCAAAAAGACTGACGCTGCCTCGCCAGAAGAGGAACCACCAAAGGAGCCCACTGAAGTAGGACCCATTTCTCTATTGCCTTCAACTGAACTGACTTTGGGAATTGGTTCGTCGTTTCAAGAAGCACATAACAATAACAAGAATATGGAGAACCTAACTCCTGATCTTGCTGAGAAGAAATTCTTCGATGGGGTTGCGGAAGATGGTGACTCCTATGCCATGTCTGATGAAGGCCGAGCAGTCCATCTCGACTTCAATCGCAACTTTCACCCAGAAATGGATCCTAAGAAGCTCAGGCGAATCATGTCAAACCGGCTTTCTGCACAGAGATCAAGATCAAAGAAAACTCAGCATGTAGCTGAGATGGAGAGGCAATCAAGATTTTTACAGACTAAGATAGCCCTTCTTCATGCACAAGTTGCAGCTTATGAGAAACAGCAACGCTTGTTGTTGATTGAGCAGCATAGAGTGAAATTACAGATGGCTGCTCTTGAAAGAGAAAGGGTAATCAAAGAAGTTGAAATTGAAATGATCAAAGCAGAAGTGAATAGGCTGACAGCACTTCAATGGAAAGAACAAGTTCAAGCACGTGAAATGAAGCTTAGCTGGGGAGCTGACTTGCGGCTTATGTGCAATTCCAACTCAAATATGCCTTCTGGCTTGGGAGATCAAGTCTCGGTTGGTACACGTGTCCTCACGCTAAATGCTCATAACTCTGTCATTAGCTTCCAGAGTAGGGAGCTTAATTGTCTTGTTACGGTGGCAAAACAAACCGACGGCACCCATTTTCTTATGGTTTTCATTCCTTGCATTTTTATGGCAGTGTCTTCCAATTTGCTTTCTTTCGCCTAA 861 0.4367 MESIKKTDAASPEEEPPKEPTEVGPISLLPSTELTLGIGSSFQEAHNNNKNMENLTPDLAEKKFFDGVAEDGDSYAMSDEGRAVHLDFNRNFHPEMDPKKLRRIMSNRLSAQRSRSKKTQHVAEMERQSRFLQTKIALLHAQVAAYEKQQRLLLIEQHRVKLQMAALERERVIKEVEIEMIKAEVNRLTALQWKEQVQAREMKLSWGADLRLMCNSNSNMPSGLGDQVSVGTRVLTLNAHNSVISFQSRELNCLVTVAKQTDGTHFLMVFIPCIFMAVSSNLLSFA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0375 286 Pfam Basic region leucine zipper 97 149 IPR004827 GO:0003700|GO:0006355
Glsi08g0375 286 MobiDBLite consensus disorder prediction 1 26 - -
Glsi08g0375 286 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 97 149 IPR004827 GO:0003700|GO:0006355
Glsi08g0375 286 SMART brlzneu 95 159 IPR004827 GO:0003700|GO:0006355
Glsi08g0375 286 MobiDBLite consensus disorder prediction 1 20 - -
Glsi08g0375 286 Coils Coil 164 184 - -
Glsi08g0375 286 Gene3D - 98 165 - -
Glsi08g0375 286 SUPERFAMILY Leucine zipper domain 99 153 IPR046347 GO:0003700|GO:0006355
Glsi08g0375 286 PANTHER BASIC LEUCINE ZIPPER 34 40 201 - -
Glsi08g0375 286 CDD bZIP_plant_RF2 100 151 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0375 Glsi-ChrGlsi08 3241162 3247158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0375 97 175 bZIP Transcription Factor Family AT3G58120 40.506 5.95e-15 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi08g0375 bZIP_2 2.7e-09 CL0018