LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi08g0364	ATGCTTGATTCAATATTGTGCCTTGGAGTCTTGGAACACCCCATTCAATCTTGGGTGTGGCAAACCGTGTTCAGGGAGATAAATACAAGCTCACCAAACCCTACAAGTGCCCTAATTAGAAAAAAAGGTTCTAGCTTACCTAATGATAGAGTAATTGGTAAAAAACCATGGTCTAATAGGATCCAAATTCTCAATACCAAACTGGATCCAGCAACCATGAACCCATCTGAGCAATTTGTGGAACATGGAATATCTCCGCAGAATTTAAAGAGGACATCTTGTGCAACTGTGCTCACTCTGGCTTATCAAAGTCTTGGAGTGGTTTATGGTGATCTCAGCACCTCCCCTCTCTATGTTTACAAGACCACCTTCTCAGGGAAATTGAGCCTCAAAGAAGATGATGAGGAAATTTTTGGGGTGCTTTCATTTATTTTCTGGACTTTCACTGTTATTGCCCTCTTCAAATATGTATTCATTGTGATGTCTGCTGATGACAATGGGGAAGGAGGTACCTTTGCATTATACTCGCTTCTTTGTCGACATGCAAAACTAAGCATATTACCTAATCAACAGCCCACAGATGAGAAGTTGTCTGCTTATGCCACAGAAGACTCTGCAGACACCTGGCAGTCTGCTCTTCTGAAGTTATTCTTTGAAAAGCACCCGAGGTTCCAGAAAGGATTGCTGATCTTTGTTCTGCTAGGAACCTGTATGGCAATTGGAGATGGTGTAATTACTCCTGCAATATCAGTTCTTTCAGCAGTTTCAGGAGTTAAAGTTAAAATAAGTCAACTCCATGATAATTATGTAGTTATAATCTCATGTGTCATTTTAGTGGGCCTTTTCTCTATTCAGCATCATGGGACACATAGAGTTGCTTTCTTGTTTGCCCCAGTTGTTGCAGCATGGCTTTTGTGTATCAGTGGTATTGGTATATACAACATACTCTACTGGAACCCACAAATATATCGCGCACTCTCTCCACTCTACATGTTGAGGTTCCTCAGGACAACAGGCATTGAAGGATGGCTGTCATTGGGGGGAGTTGTTCTTTCAATCACAGGTGTGGAGACTATGTTTGCTGATTTGGGTCATTTTTCAGCACTCTCAATAAAGATAGCTTTCACATGCCTAGTATATCCCTGCTTGATTCTGGCATATATGGGTGAGGCTGCATTCCTCTCCAAGCACCATGATGACATTCAGAGAAGTTTCTACAAAGCCATACCAGAAACTGTGTTTTGGCCAGTGTTCATAGTGGCCACTTTTGCAGCTGTTGTAGGAAGTCAAGCAGTAATTTCTGCTACTTTTTCCATAATTAGCCAGTGCTGTGCATTAAATTGTTTTCCTCGAGTGAAGATTATTCATACTTCAAGTAGAATTTATGGACAGATATACATCCCAGAAATCAATTGGTTATTAATGTGCCTTTCTTTAGCTGTCACAATTGGCCTGAGGGACACAAACATGATTGGTCATGCATATGGACTGGCAGTGACCACTGTTATGTTTGTGACAACATGCTTGATGATACTAGTAATTGTGATTGTGTGGAAGCAAGGATTGTTAAAAGCCATCACATGTTTGCTCTTGTTTGGATCAATAGAACTACTTTACATCTCAGCTTCCATCTGCAAGGTCCCTGAAGGAGGGTGGATCCCACTTGTGCTATCTTTTATCTTTATGGGTATAATGTATACATGGAACTATGGAACAATGAAGAAACACCAATTTGATGTGGAAAACAAGGTTTCAATGAGCAGGATACTATCTTTGGGACCTTGCCTAGGTATAGTCCGTGTCCCTGGAGTAGGACTCATCTACACTAATCTGGCTTCTGGGGTCCCTGCTATTTTTGGCCATTTTGTTACAAACTTGCCAGCATTCCATCAGGTGCTAGTTTTTGTCTGTGTCAAATCTGTTCAAGTCCCTTATGTTAGTGAAAATGATCGGTTGCTCATCAGCCGGGTTGGCCCGAAGGAATATGGTATGTTTCGTTGCATTGTCAGGTATGGTTACAAGGATCTGCAACAAGAGAACTATAATTTTGAGAATAGGTTGCTGTCTGGGATAGTACAATTTGTAGAAACAGAAGAGGAGAGTACAAACGTTGGAAACTCAAATATGGAAGACCTTGGCGTTGCACAGTACACTTCTAATAGGTCATATTGTCAAGAGAACTTGCCTCCATCTTCAAGTCTTTTGCGGGTGGTGAAAAATAATGATGGCAATCTTGAAGAGTCTCTCTGTAAAGATGAGTCTCTGCAGATTCTGAAAGCCAAGGAGTCTGGTGTTGCCTATATACTTGGGCATTCCTATGCAAAGGCAAAGAAATCATCATCCATCTTGAAGAAATTGGCCATAGATGTTGTTTTTGCTTTTCTAAGCAAGAATTGCAGAGAGCCTGATGTTGTGCTGAAAGTAACTCATACTTCTTTGCTAGAGGTTGGTATGATTTACTATGTCTAA	2469	0.4095	MLDSILCLGVLEHPIQSWVWQTVFREINTSSPNPTSALIRKKGSSLPNDRVIGKKPWSNRIQILNTKLDPATMNPSEQFVEHGISPQNLKRTSCATVLTLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLKEDDEEIFGVLSFIFWTFTVIALFKYVFIVMSADDNGEGGTFALYSLLCRHAKLSILPNQQPTDEKLSAYATEDSADTWQSALLKLFFEKHPRFQKGLLIFVLLGTCMAIGDGVITPAISVLSAVSGVKVKISQLHDNYVVIISCVILVGLFSIQHHGTHRVAFLFAPVVAAWLLCISGIGIYNILYWNPQIYRALSPLYMLRFLRTTGIEGWLSLGGVVLSITGVETMFADLGHFSALSIKIAFTCLVYPCLILAYMGEAAFLSKHHDDIQRSFYKAIPETVFWPVFIVATFAAVVGSQAVISATFSIISQCCALNCFPRVKIIHTSSRIYGQIYIPEINWLLMCLSLAVTIGLRDTNMIGHAYGLAVTTVMFVTTCLMILVIVIVWKQGLLKAITCLLLFGSIELLYISASICKVPEGGWIPLVLSFIFMGIMYTWNYGTMKKHQFDVENKVSMSRILSLGPCLGIVRVPGVGLIYTNLASGVPAIFGHFVTNLPAFHQVLVFVCVKSVQVPYVSENDRLLISRVGPKEYGMFRCIVRYGYKDLQQENYNFENRLLSGIVQFVETEEESTNVGNSNMEDLGVAQYTSNRSYCQENLPPSSSLLRVVKNNDGNLEESLCKDESLQILKAKESGVAYILGHSYAKAKKSSSILKKLAIDVVFAFLSKNCREPDVVLKVTHTSLLEVGMIYYV	822

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi08g0364	822	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	92	821	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi08g0364	822	Pfam	K+ potassium transporter	102	675	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Glsi08g0364	822	NCBIfam	potassium uptake protein	100	822	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi08g0364	Glsi-ChrGlsi08	3182227	3187646	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi08g0364	194	822	Inorganic Solute Cotransporters	AT2G30070	69.634	0.0	911