Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0361 ATGTCTGTTGCCATTTCTAATTCTCGGGTGTCTTCACTCTTCTGCAACAAGTCCTCCATCATCCCTTCTTCCGCTGAAGCAGTTGCGCTATCTTTGGCCCACCTTAAGCCTCCGCCTGCCTCCTCGTCTTCTTCTTCGTCCCCTTCTTCGCCCTCCTCCCCCTTCGGGTTTCGCCTTGGGTTTTCCAATTCGGCCCCTGCCTCGACTTCGGCTCCGTCATCCTCCACCTCGCCGACCGGCTCCGTTTTGAAGAGGAAGAGACCCGCAAGGCTTGATATACCGGTCGGGTCTCTTGCCTTTGGGGCTCCGCTGACGCCCGCGCCGGTGGCTCGCGATGTTATAGAGATTGAAGGAAACGGGTTTTCTGTGTATTGCAAGAGGGGAAGGAGAGAATACATGGAGGACCGTTACTCGGCTGCCGTTGATCTCCAAGGAGAACCCAAGCAGGCTTTCTTTGGCATATTTGATGGCCATGGAGGAGCAAAAGCTGCAGAATTCGCTGCTCATAACTTAGAAAAGAATGTCTTGGATGAAATGATCAGGAGAGATGAAGATGATATTGAGGAGGCAGTGAAGCTTGGTTACCTGACCACAGATTCTGATTTCTTAAAAGAGGATATCCGAGGTGGTTCTTGCTGTGTAACAGCCTTGATTCGGAACGGTAACCTCGTAGTTTCCAATGCCGGTGATTGTCGCGCTGTCATTTGCCGAGGAGGTGCTGCAGAGGCCCTCACATCCGACCACCGACCTTCAAGGGAAGATGAGAGGGACAGAATTGAAGCTCTGGGTGGCTATGTTGATTTATGCCGTGGTGTTTGGAGGATCCAGGGATCTCTAGCTGTATCTAGAGGGATCGGTGATCGACACCTAAAGCAATGGGTGACAGCAGAACCTGAGACTAAAGTTCTCAAAATTGAACCTGAACACGATTTGTTAATATTAGCTTCAGATGGATTATGGGAAAAGGTCGCCAATCAGGAAGCAGTAGATATCGCTCGTTCTTTTTGCATAGAGAGTGATATACCACAGCCATTGTTGGCCTGTAAAAAGCTTGTGGATCTGTCGGTGTCACGAGGCTGTCTTGATGATATAAGTGTTATGCTAATCAAATTGGAGCACTATATATGA 1128 0.4956 MSVAISNSRVSSLFCNKSSIIPSSAEAVALSLAHLKPPPASSSSSSSPSSPSSPFGFRLGFSNSAPASTSAPSSSTSPTGSVLKRKRPARLDIPVGSLAFGAPLTPAPVARDVIEIEGNGFSVYCKRGRREYMEDRYSAAVDLQGEPKQAFFGIFDGHGGAKAAEFAAHNLEKNVLDEMIRRDEDDIEEAVKLGYLTTDSDFLKEDIRGGSCCVTALIRNGNLVVSNAGDCRAVICRGGAAEALTSDHRPSREDERDRIEALGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVLKIEPEHDLLILASDGLWEKVANQEAVDIARSFCIESDIPQPLLACKKLVDLSVSRGCLDDISVMLIKLEHYI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0361 375 MobiDBLite consensus disorder prediction 64 82 - -
Glsi08g0361 375 ProSitePatterns PPM-type phosphatase domain signature. 151 159 IPR000222 GO:0043169
Glsi08g0361 375 CDD PP2Cc 119 371 IPR001932 -
Glsi08g0361 375 Gene3D - 114 374 IPR036457 -
Glsi08g0361 375 PANTHER PROTEIN PHOSPHATASE 2C 63 369 IPR015655 GO:0004722|GO:0006470
Glsi08g0361 375 SMART PP2C_SIG_2 131 371 IPR001932 -
Glsi08g0361 375 MobiDBLite consensus disorder prediction 35 54 - -
Glsi08g0361 375 MobiDBLite consensus disorder prediction 64 86 - -
Glsi08g0361 375 SUPERFAMILY PP2C-like 120 372 IPR036457 -
Glsi08g0361 375 Pfam Protein phosphatase 2C 121 363 IPR001932 -
Glsi08g0361 375 ProSiteProfiles PPM-type phosphatase domain profile. 120 371 IPR001932 -
Glsi08g0361 375 SMART PP2C_4 113 369 IPR001932 -
Glsi08g0361 375 MobiDBLite consensus disorder prediction 37 54 - -
Glsi08g0361 375 FunFam probable protein phosphatase 2C 25 113 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0361 Glsi-ChrGlsi08 3151088 3152846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0361 2 375 PP2C-type Phosphatase Gene Family AT2G30020 61.323 3.64e-155 441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0361 08 3151088 3152846 Glsi08g0361 08 3151088 3152846 ECH