Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0347 ATGACCAATTCACTCTCCTCTCTTTCTTTCACCTTTGCCTGCATCTCCATCATATTCTTTTCTCTGCCGTACCCAACCGCCGTTAACAGCCTTGGCTCTGGCTCCACTACCGCCATTACCTACGGCACCGGCACGGTTTGCGGCATTATCGCCGGCGAGCCTTCGCAGAGAATCCAATGCTACCAAAATGGTCAAATATTTCTAGTCCTACCCAATGTATCCTTCCAAGCCATCTCAGGTGGCCAGAGGTTCTTCTGCGGGCTCAGGTCTGGTGGGTTCAGCCTTCATTGTTGGGACACTGTTGTATCAAATTCAAGATTCCAACCAAAACGCTTGTATTACAGTAATTCCGTTCAGTTGACTGATCTAACTGTTGGAGATGCCCAAGTTTGTGCCAGAGAGGTGGACTCTGGTATAGCCAGGTGCTGGAGAGGAGGTAATGGTGGAAGAAATGGTCACGAAATTCCTTCACCTGGGGAGGCACTTCGTTTTCTTAGCATCACTTCTGGAAGTGGGTTTTCATGTGGGATTTTGAAGGCAAACAATAGTGTTTGGTGTTGGGGTCAGAGAGAAATTGGGGCTGAAATTCAGAGGCAGTTCGGGAATCTGACAATATCAATCTTGGTTGCCGGAGAGTCTCATGTTTGCGGTTTGACCATGAAAGGGGTTTTGGTCTGTAAAGGAAACAATGATTCTGGGCAACTGAATGTTCCTTTTAGTTCAACTTCAGAATTTTCAGGTCTTGCTTTGGGAGCACATTTCACTTGTGCTATCAGGCGCAGGAATGGACTGGTAGTGTGCTGGGGAGGAACCAATAGATTTGAGTTCGACAGTGATGTGATCCAAAATGTTTCGTATGAGTCAATAGTTGCTGGTTTGGATTTTGTTTGTGGGTTGACGACAGGAAATTTGACTGTCATTTGTTGGGGACCTGGTTGGTCTGTTAGGCTTAACTTACCTAGCAAGCTTCCATTGGCAATGGTGATTCCAGGTCCATGTGTTCAGGATTCTTGTAGTACTTGTGGTACATATCCAAATTCTGAGGTTCTGTGTCATGGGTCTGGAAGCATATGCTATTCATGTCAGACTGAGAATCCACTAGCAGTGCCATTGCCACAAAATCCATCAACATCACCAAATTCCCCGACACATTCACCCGAAGAAAGAAACAGAAGAGAATTGTTGGCATTTCTGATTGTTGGATCTTCTGGGGCTTTTGTGGGTCTTTGCTCAATCATTTACTGCTTCTGGGTTGGAACTTGCAGCATATTGCAGAGAAAAGTTGACAATTCTGTGCAACCCACAGGCTCTGAGGCAAATGTGGATGTTCCCATGCCTACTACTGGTTCTACTGATACAACCATAAGATCAATTTCTAGCAAACAACAGAGTTCATGGACATTGAGGAGCCTTAGAAGTGGTGGGTCATCATCAAAGCATGTGGACAAGATAGAGAGTTTCACATTATCTGAACTAGCCGCTGCCACAAACCACTTCTCAGTAGATAACAAAATAGGTGCTGGGAGCTTCGGGATTGTTTACAAAGGCAAGCTAGCAGATGGCCGTGAAGTGGCCATTAAAAGGGGAGAAACCAGCACCAAAAAGAAGTTGTTTCAGGAGAAAGAAATTGCATTTGATTCTGAATTGGCTTTGTTATCTAGGCTTCATCACAAACACCTGGTGAGCTTAATTGGGTTCTGCGAGGAAAACGATGAGAGGCTTCTGGTTTATGAGTTTATGAGCAATGGATCCCTCCACGATCATCTGCATAACAAGAACAACAGAGAGAAAAGCAGCAGCATTTTGAATTCATGGAGGATGAGGATCAAGATTGCACTAGATGCTGCTAGGGGAATAGAGTATCTTCACAAATATGCAGTACCCTCAATTATTCACAGAGACATAAAGTCCTCAAACATACTCTTGGATTCAAATTGGAATGCCAAAGTCTCTGATTTTGGATTATCACTAATGGGTCCTGAGAATCAGCAAGAAGTGATGTCTACAAGTGCTGTTGGAACTGTTGGGTACATAGACCCAGAGTACTATGTGTTAAACGTGTTAACCACAAAAAGTGATGTTTATGGATTAGGGGTGGTGATGCTGGAGCTTCTGACAGGGAAGAGAGCAGTGTTCAAGAATGAAGAAGATGGGTCAAGCCCAGTTGGGGTGGTGGAATATGCAGGGCCAAGGATAGGAGGAGGAGAGCTATGGAGTGTGTTGGATTACAGAGTTGGGGAGGCAGAAATGAATGAGGCAGAGGCTCTTGAGGTTATGGCTTACACTGCAATGCACTGTGTGAACTTGGAAGGGAAGGAGAGACCTAGTGTGAGTGACATCGTTGCTAACTTGGAAAGGGCAATGGCTTTTGTTGAAGGAAGTCCTGGTAGCTTCTCAATCACTGCATTCTCATCCTCCGCCCCCTTGGAATGA 2433 0.4509 MTNSLSSLSFTFACISIIFFSLPYPTAVNSLGSGSTTAITYGTGTVCGIIAGEPSQRIQCYQNGQIFLVLPNVSFQAISGGQRFFCGLRSGGFSLHCWDTVVSNSRFQPKRLYYSNSVQLTDLTVGDAQVCAREVDSGIARCWRGGNGGRNGHEIPSPGEALRFLSITSGSGFSCGILKANNSVWCWGQREIGAEIQRQFGNLTISILVAGESHVCGLTMKGVLVCKGNNDSGQLNVPFSSTSEFSGLALGAHFTCAIRRRNGLVVCWGGTNRFEFDSDVIQNVSYESIVAGLDFVCGLTTGNLTVICWGPGWSVRLNLPSKLPLAMVIPGPCVQDSCSTCGTYPNSEVLCHGSGSICYSCQTENPLAVPLPQNPSTSPNSPTHSPEERNRRELLAFLIVGSSGAFVGLCSIIYCFWVGTCSILQRKVDNSVQPTGSEANVDVPMPTTGSTDTTIRSISSKQQSSWTLRSLRSGGSSSKHVDKIESFTLSELAAATNHFSVDNKIGAGSFGIVYKGKLADGREVAIKRGETSTKKKLFQEKEIAFDSELALLSRLHHKHLVSLIGFCEENDERLLVYEFMSNGSLHDHLHNKNNREKSSSILNSWRMRIKIALDAARGIEYLHKYAVPSIIHRDIKSSNILLDSNWNAKVSDFGLSLMGPENQQEVMSTSAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKNEEDGSSPVGVVEYAGPRIGGGELWSVLDYRVGEAEMNEAEALEVMAYTAMHCVNLEGKERPSVSDIVANLERAMAFVEGSPGSFSITAFSSSAPLE 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0347 810 FunFam receptor-like protein kinase FERONIA 460 579 - -
Glsi08g0347 810 Gene3D - 25 198 IPR009091 -
Glsi08g0347 810 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 204 794 IPR044815 GO:0004674
Glsi08g0347 810 SUPERFAMILY RCC1/BLIP-II 163 356 IPR009091 -
Glsi08g0347 810 ProSiteProfiles Protein kinase domain profile. 499 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0347 810 FunFam Serine/threonine-protein kinase-like protein CCR4 580 797 - -
Glsi08g0347 810 Gene3D - 199 364 IPR009091 -
Glsi08g0347 810 SUPERFAMILY Protein kinase-like (PK-like) 475 785 IPR011009 -
Glsi08g0347 810 Pfam Protein kinase domain 500 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0347 810 Gene3D Phosphorylase Kinase; domain 1 471 579 - -
Glsi08g0347 810 MobiDBLite consensus disorder prediction 434 454 - -
Glsi08g0347 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Glsi08g0347 810 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Glsi08g0347 810 SMART serkin_6 499 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0347 810 Gene3D Transferase(Phosphotransferase) domain 1 580 793 - -
Glsi08g0347 810 CDD STKc_IRAK 505 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0347 Glsi-ChrGlsi08 3037269 3039701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0347 3 799 Receptor kinase-like Gene Family AT3G55950 53.228 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Glsi08g0347 Pkinase 7.6e-46 CL0016