Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0336 ATGGAGGAGGAGCTGCAGAAGGACCTGGAGAAGAACAAAGAGGCGGTTTCATCTTCATCTTCTTCTTCGAAGATGATGAGGAAGAAGTCAGATCCAATTATGGTGACCAACAACGTTCGGTTCCAAATGCTTAAGAGCTTCATAACAAACTTGCAGGAGGTCATCTTTGGCACTAAGCTTGCTGTGCTTTTTCCAGCCATTCCTCTAGCTGTTGTTGCAGACACATATAGCTTCGGAAGGCCTTGGATTTTTGCTTTGAGCCTACTTGGACTGGCCCCACTAGCTGAACGTGTCAGCTTCCTCACCGAGCAAATTGCATATTTCACTGGCCCAACAGTTGGAGGGCTTCTGAATGCAACCTGCGGAAATGCAACTGAAATGATCATAGCATTATTGGCACTTCACAAGAACAAAGTGAATGTTGTGAAGTTCTCACTTCTGGGTTCCATTCTCTCAAACCTTCTTCTGGTTCTTGGGACTTCCCTTTTCTGTGGAGGACTAGCCAACCTCAAGAGAGAACAAAGATATGACAGAAAACAGGCAGACGTAAACTCACTGCTATTGTTACTGGGGTTGCTGTGCCATTTGCTGCCCTTAATGTTCAAGTACGCGCTAGCAGGGGGATATTACCCTATAGCCACATATACACTTCAACTGTCAAGAGCAAGCAGCGTTGCTATGCTTATAGCATATGCTGCTTATATCTTCTTCCAATTGAAAACTCATCGACAGTTGTTTGATTCCCAAGAGGGAGATGAAGATGAAGAAAAGCCTGTGATAGGATTTTGGAGTGCATTTACCTGGTTGGTGGGTATGACACTGGTCATATCTTTGCTTTCCGAATATGTTGTGGGAACCATTGAGGCTGCTTCTGATTCTTGGGGCATTTCTGTGAGTTTCATAAGCATAATTTTGCTACCAATAGTGGGGAATGCTGCAGAACATGCCGGTTCAATCATATTTGCTTTCAAGAACAAGTTGGACATATCCTTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGGTTGTTGCATGGATAATGGGGATAAAAATGGATCTAGATTTCAATCTCTTGGAAACAGGGTGTCTTGCTTTCACAATAATTGTCACAGCTTTCACCTTGCAGGATGGAACCTCACACTACATGAAAGGGGTGGTCCTTACCTTGTCTTACATTATCATTGCTGCATGCTTTTTTGTTCACAAAGCTCCACTCCCGAATCAAATTCCAGGGGGCAATGTCTTGGGTGCCATGGCCACTTGA 1290 0.4395 MEEELQKDLEKNKEAVSSSSSSSKMMRKKSDPIMVTNNVRFQMLKSFITNLQEVIFGTKLAVLFPAIPLAVVADTYSFGRPWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHKNKVNVVKFSLLGSILSNLLLVLGTSLFCGGLANLKREQRYDRKQADVNSLLLLLGLLCHLLPLMFKYALAGGYYPIATYTLQLSRASSVAMLIAYAAYIFFQLKTHRQLFDSQEGDEDEEKPVIGFWSAFTWLVGMTLVISLLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIKMDLDFNLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLTLSYIIIAACFFVHKAPLPNQIPGGNVLGAMAT 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0336 429 NCBIfam calcium/proton exchanger 45 408 - -
Glsi08g0336 429 NCBIfam calcium/proton exchanger 65 408 IPR004798 GO:0006816|GO:0015369
Glsi08g0336 429 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 14 413 IPR004713 GO:0006812|GO:0008324|GO:0016020
Glsi08g0336 429 MobiDBLite consensus disorder prediction 1 29 - -
Glsi08g0336 429 Gene3D - 257 409 IPR044880 -
Glsi08g0336 429 Gene3D - 111 251 IPR044880 -
Glsi08g0336 429 FunFam Vacuolar cation/proton exchanger 255 409 - -
Glsi08g0336 429 FunFam Vacuolar cation/proton exchanger 111 254 - -
Glsi08g0336 429 Pfam Sodium/calcium exchanger protein 82 239 IPR004837 GO:0016020|GO:0055085
Glsi08g0336 429 Pfam Sodium/calcium exchanger protein 265 406 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0336 Glsi-ChrGlsi08 2966409 2970257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0336 7 413 Antiporters AT2G38170 68.193 0.0 534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0336 08 2966409 2970257 Glsi08g0336 08 2966409 2970257 ECH