Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0327 ATGGAGGCTTCATGGGAACAAAGCGTTACTCACTCTATCAACACTATCTACCTTCTCTTCTCTGCCTACCTCGTCTTTGTTATGCAGATTGGCTTTGCCATGCTATGTGCAGGCTCTGTCCGAGCCAAGAATGCCATGAACATCATGCTCACCAACGTTGTGGATGCCGTCGTAGGTAGCATCTCTTTCTACCTTTTCGGCTTTGCATTTGCCTACGGCGATGGTTCTGCTTCCAATCCTTTCATTGGTACTGATCTATTTGCTCTTGTCAATCTTCCAAATGGTACTTACGATTATAGTTTCTTCCTTTACCAATGGGCTTTTGCTATAGCAGTAGCAGGCATCACTAGTGGGTCCATTGCTGAGCGAACCCAGTTCAGTGCTTATCTTGTTTTCTCTTTTTTCCTTAGTGGGTTTGTGTACCCAGTTGTGGTCCATTGGGTCTGGTCGTCCAGTGGTTGGCTCAGTCCTGGTTCTAGTCAATTGTTTTTGGGCTCCGGAGCCATTGACTTTGCCGGCAGTGGAGTGGTGCATTTGGTTGGTGCAACTGCTGGGCTTTGGGGATCCCTCATAGAAGGCCCACGGGTTGGGCGGTTCGATGCCTTTGGCAAGCCTCTACCTCTTCGAGGCCACAACGCCACACTTGTGGTACTCGGCACATTCCTTTTGTGGTTTGGATGGTTTGGGTTTAATCCAGGCTCTTTTGATAAGATCCTTGTGGCTTATCCTAACACGTCAGATCAAGGAAATTGGACTTCCGTCGGTCGGGTTGCAGTTGTGACTACATTAGCTGGCTCAACCTCTGGGATTGTCACACTGTTTGGGCGACGACTATTAATCGGCCATTGGGATGCAATAGATGTCTGCAATGGCTTGCTCGGTGGATTTGTCGCAATCACCTCTGGATGCTCAGTTGTTGAGCCTTGGTCTGCCATTGTTTGCGGGCTTGTGTCGGCTTGGGTCTTGATTGGGCTCAACATCTTAGCACTAAAATTGAACTATGATGACCCATTAGAGGCAGCCCAATTGCATGGCGGGTGTGGGGCTTGGGGTTTGATATTCACAGGTTTGTTTGCCAAAGAGGAATTTGTGATTCAAACCTATAATTCAGGTGAGATAGGGGCGACAAGACCCTATGGTCTCCTATTAGGAGGTGGATGGGGTTTGATTGGGGCCCAAGTCACTGAACTGTTGGTAATCTTGGGCTGGGTTAGTGCCACAATGGGGCCTATGTTCTATGCCTTACACAAGCTTGAGATACTGAGAATCTCCACAGAAGAAGAAGTTACTGGCCTTGATATTTCAAGCCATGGAGGCTATGCTTATGCTCCTCAAGAGGAAAATTATCCTCGATCTTATGCAGATTATATGCGTATGAGAGATGATCAATCCTAA 1395 0.4767 MEASWEQSVTHSINTIYLLFSAYLVFVMQIGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGDGSASNPFIGTDLFALVNLPNGTYDYSFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLSGFVYPVVVHWVWSSSGWLSPGSSQLFLGSGAIDFAGSGVVHLVGATAGLWGSLIEGPRVGRFDAFGKPLPLRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVAYPNTSDQGNWTSVGRVAVVTTLAGSTSGIVTLFGRRLLIGHWDAIDVCNGLLGGFVAITSGCSVVEPWSAIVCGLVSAWVLIGLNILALKLNYDDPLEAAQLHGGCGAWGLIFTGLFAKEEFVIQTYNSGEIGATRPYGLLLGGGWGLIGAQVTELLVILGWVSATMGPMFYALHKLEILRISTEEEVTGLDISSHGGYAYAPQEENYPRSYADYMRMRDDQS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0327 464 FunFam Ammonium transporter 1 456 - -
Glsi08g0327 464 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Glsi08g0327 464 SUPERFAMILY Ammonium transporter 11 423 - -
Glsi08g0327 464 NCBIfam ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Glsi08g0327 464 Gene3D Ammonium transporter AmtB like domains 2 458 IPR029020 -
Glsi08g0327 464 PANTHER AMMONIUM TRANSPORTER 10 438 - -
Glsi08g0327 464 Pfam Ammonium Transporter Family 18 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0327 Glsi-ChrGlsi08 2911266 2912660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0327 7 448 Inorganic Solute Cotransporters AT1G64780 65.848 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0327 08 2911266 2912660 Glsi08g0327 08 2911266 2912660 ECH