Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0323 ATGCCAGCCATCGTTATGCCGGAGAAGACCGCTTCCAATGCCCGATCTGACGGCAGCTCTACTCCTCAGAAGCGGAGACTGAGATCTATGGGGCCGCTGATGATGGATAGTCCGATCTCTTCGCCAGTGAAATGGAAATCGCCCCGCCGGTGTAGTAGTGCAAGCCCAAACCGTGCTGTGACTGGGAACGAGATGAATACTAATAAAAAGGAAGCCAGGTCGCTTATATTGCCAGCGAAGCCGTTGCCGGATAGTTTGGCTGTCAAACCGAAATGGAATCCCAAAGATAGTGAGCAAATAAGGATGGTGAAGGAGGCAATGCACGTGTCCACTGCACCATCTACCATTGTGTGCCGTGAGGATGAGCAGAACATGGTTTTCGAGTTCTGCAAGTCATGCATTGAGCATGAGAAATCTGGGAGTTTATACATATGTGGGTGTCCTGGCACTGGCAAATCGTTATCCATGGAGAAGGTGAAAGAGCTTTTAGTCAACTGGGCTAGACAGGCAGGTTTCCTGCAGCCACATGTTTTATCTGTAAATTGTACTTCCCTTGCTAATACATCTGACATTTTCAGCAAGATACTTGGGTTAAACCAACCGCGGGGAAAAAAGATTTCGGCTACACCCTTACAACAACTTCAGAACATGTATTCTCAAAAGTCGTCTAGCAAGAACATGATATTGATAGTAGCTGATGAATTAGATTATCTAATTACCAAAGACAGGGCTGTGCTTCACGATCTTTTCAAGCTCACCACGTTCCCATTTTCCAGATGTATATTAATAGGGGTAGCAAATGCAATTGACCTAGCTGATCGTTTTCTTCCAAGGTTAAAATCATTAAATTGCAAGCCCATCATTGTAACTTTCCGCGCCTACTCTAAAGACCAGATCCTTAGGATTCTGCAAGAAAGGCTAAGTGAACTTCCTTACACTGTCTTCCAACATCAAGCACTAGAGCTCTGTGCTAGGAAAGTTGCGGCAGCTTCTGGTGATATGCGGAAAGCTCTTAGTATTTGCAGGAGCGCAATAGAGATGCTGGAAGCAGAAATCAGAGAATCTACCGGTGTCTTAGAAATTTCTTTGGAAGAGAAAGCATCCCCTGGAAAAACGATAGTTTCAACTCCTGATTACATAAAAGAAAAAGAATCTGCTATTGTAAGGATTGATCATATGGCTCTTGCCTTGTCAAAGACATATAGATCGCCTGTGGTGGATACAATACAATCTCTACCACATCATCAACAGATTGTACTCTGCTCTTCTATGAAACGTTTCCGTGGAGCAAAGAAAGATACAATACTTGGGGAGTTGTATAAATCTTACATGGACATATGCAAATCATCACTAATTTCACCAGCCGGCATTTTGGAATTTTCAAATATGTGCAGAGTACTGAATGACCAGGGGCTCATTAAACTAGGACAGTCGCGAGAGGACAAATTGAGAAGGGTGACACTGAAAGTAGATGACGATGATATTACCTTCGCATTGCAGGGAATCCGGTTCTTTCGAAACTGTCTTCAATGA 1533 0.4371 MPAIVMPEKTASNARSDGSSTPQKRRLRSMGPLMMDSPISSPVKWKSPRRCSSASPNRAVTGNEMNTNKKEARSLILPAKPLPDSLAVKPKWNPKDSEQIRMVKEAMHVSTAPSTIVCREDEQNMVFEFCKSCIEHEKSGSLYICGCPGTGKSLSMEKVKELLVNWARQAGFLQPHVLSVNCTSLANTSDIFSKILGLNQPRGKKISATPLQQLQNMYSQKSSSKNMILIVADELDYLITKDRAVLHDLFKLTTFPFSRCILIGVANAIDLADRFLPRLKSLNCKPIIVTFRAYSKDQILRILQERLSELPYTVFQHQALELCARKVAAASGDMRKALSICRSAIEMLEAEIRESTGVLEISLEEKASPGKTIVSTPDYIKEKESAIVRIDHMALALSKTYRSPVVDTIQSLPHHQQIVLCSSMKRFRGAKKDTILGELYKSYMDICKSSLISPAGILEFSNMCRVLNDQGLIKLGQSREDKLRRVTLKVDDDDITFALQGIRFFRNCLQ 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0323 510 FunFam Cell division control protein 283 409 - -
Glsi08g0323 510 Pfam CDC6, C terminal winged helix domain 420 498 IPR015163 -
Glsi08g0323 510 CDD Cdc6_C 413 495 IPR015163 -
Glsi08g0323 510 Gene3D - 409 499 IPR036388 -
Glsi08g0323 510 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 32 508 - -
Glsi08g0323 510 SMART Cdc6_C_2 420 499 IPR015163 -
Glsi08g0323 510 MobiDBLite consensus disorder prediction 46 63 - -
Glsi08g0323 510 PIRSF Cdc6 3 510 IPR016314 GO:0006270|GO:0051301
Glsi08g0323 510 CDD AAA 122 283 - -
Glsi08g0323 510 FunFam Cell division control protein 97 282 - -
Glsi08g0323 510 Gene3D - 96 283 IPR027417 -
Glsi08g0323 510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 353 IPR027417 -
Glsi08g0323 510 MobiDBLite consensus disorder prediction 1 63 - -
Glsi08g0323 510 Gene3D - 284 408 - -
Glsi08g0323 510 FunFam Cell division control protein 412 502 - -
Glsi08g0323 510 MobiDBLite consensus disorder prediction 12 26 - -
Glsi08g0323 510 Pfam AAA domain 138 254 IPR003593 GO:0016887
Glsi08g0323 510 SUPERFAMILY "Winged helix" DNA-binding domain 405 508 IPR036390 -
Glsi08g0323 510 Pfam AAA lid domain 316 351 IPR041083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0323 Glsi-ChrGlsi08 2885592 2891600 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0323 1 509 Core DNA Replication Machinery Family AT2G29680 57.895 0.0 594