Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0314 ATGGAGAGCCTTCCTCTTGTGTTCACTCTGACAGCTGCTTTCTCTGCATATTTCCTCTGGTTCTATCTCCTTGCTCGAACTCTCACTGGTCCTAAAATATGGCCCTTCGTGGGTAGCCTTCCCCTTCTCATCAAGAACCGATGTAGAGTCCATGACTGGATCGCTAGCAATCTCCGTTCAGCCGGTGGTTCAGCCACCTACCAAACCTGCATTCTCCCTCTGCCTTTCTTGGCTCGCAAACAAGGGTTCTACACAGTCACCTGCCACCCCAAGAACATCGAACACATCCTCCGTACCAGGTTCAGTAACTACCCCAAAGGTCCCCAATGGCAAACCGCTTTCCATGATCTTCTCGGTCAAGGTATCTTCAACAGCGACGGAGAAACATGGCTCATGCAACGTAAAACCGCAGCTCTAGAGTTCACGACTCGAACGCTTAGGCAAGCCATGGCTCGTTGGGTGAACCGGACCATCAAGAACCGTCTATGGTGTATTCTAGATAAGGCTGCCAAAGAAAAGGTCTCGGTGGACTTGCAGGACCTTCTTCTCCGCTTAACTTTTGATAATATATGTGGACTCACCTTTGGTAAAGACCCCGAAACTCTCTCTCCTGATCTACCCGAAAACCCGTTTTCTATTGCTTTCGATACCGCCACAGAGGCTACCATGCATAGGCTCCTCTACCCGGGTCTCTTGTGGAGGATCCAGAAGCTTCTGGATATTGGAGACGAGAACAGGCTGAATCAGAGCCTTCGAATCGTTGAAAATTACATGAACGACGCCGTTGCGGCTCGTAAGACAGCCCCATCGGACGACTTGCTCTCGCGGTTCATGAAGAAATTGGACGCTGATGGCAACCCTATCCCGACGCCCGTGCTCCAACGGATCGCTTTGAACTTCGTGCTCGCAGGCCGGGACACCTCGTCGGTGGCGCTAAGCTGGTTCTTCTGGCTGGTCATGAACCACCCTCACGTCGAGACCAAGATCGTCAACGAGATAGCATCTGTTCTCCGGGAAACACGCGGCGATGATCGGCAGAAATGGGTTGAAGAAGCTCTGGACTTCGATGAAGCAGATCGGCTAGTTTATTTGAAAGCTGCATTATCCGAAACGCTGCGTTTGTATCCGTCGGTGCCTCAGGACTTCAAGTACGCCGTCTCAGACGACATCTTGCCGGACGGGACGTTCGTGCCGGCGGGATCGACAGTGACTTATTCGATATACTCGGTGGGGAGGATGAAGACGATATGGGGAGAGGACTGTATGGAGTTTAAACCGGAGAGGTGGCTATCGGCAAGGGGAGACCGGTTCGAACCGCCGAAGGATGCATATAAGTTTGTGGCTTTCAACGCTGGACCAAGAACTTGCTTGGGAAAGGACTTGGCTTACCTGCAAATGAAGTCTGTGGCGGCCGCCGTACTGTTGCGGTACCGGCTATCGCAAGTTCCCGGTCACCGGGTGGAGCAGAAGATGTCACTCACCCTCTTCATGAAGAATGGGCTCCACGTGTTCTTGCATGCACGTAAGCTTCAAGTTGGAGCCGGGGTTGCCACGTCAGCCTAG 1563 0.5266 MESLPLVFTLTAAFSAYFLWFYLLARTLTGPKIWPFVGSLPLLIKNRCRVHDWIASNLRSAGGSATYQTCILPLPFLARKQGFYTVTCHPKNIEHILRTRFSNYPKGPQWQTAFHDLLGQGIFNSDGETWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKEKVSVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPENPFSIAFDTATEATMHRLLYPGLLWRIQKLLDIGDENRLNQSLRIVENYMNDAVAARKTAPSDDLLSRFMKKLDADGNPIPTPVLQRIALNFVLAGRDTSSVALSWFFWLVMNHPHVETKIVNEIASVLRETRGDDRQKWVEEALDFDEADRLVYLKAALSETLRLYPSVPQDFKYAVSDDILPDGTFVPAGSTVTYSIYSVGRMKTIWGEDCMEFKPERWLSARGDRFEPPKDAYKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSQVPGHRVEQKMSLTLFMKNGLHVFLHARKLQVGAGVATSA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0314 520 Gene3D Cytochrome P450 24 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Glsi08g0314 520 CDD CYP86A 68 501 - -
Glsi08g0314 520 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 FunFam Cytochrome P450 22 511 - -
Glsi08g0314 520 Pfam Cytochrome P450 85 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g0314 520 PANTHER CYTOCHROME P450 21 503 - -
Glsi08g0314 520 SUPERFAMILY Cytochrome P450 19 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0314 Glsi-ChrGlsi08 2818740 2820803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0314 1 508 Cytochrome P450 AT5G58860 77.647 0.0 836