Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0255 ATGAGCAGTGAGCAGTCCCAGTATGACCAAACAGGACTCTCAAATGTCAACTTTTGGAAGTGTGTGCAAAAACGGACTGCAATACCAGCTAGGAGGCTGTATGAGTTTGTGTTTTGTAAAGTTTTCAGTGGGGATGCTGAAGTGCCGGCAGCGCTTTACTATTTTGTTTTAATTAGTGAATCCAACTTATTAGATGAATTGTCTGAGAGATGCAAGATGAATTCTCCAAATGAAAGACCAATTCGGGAGTTCGAAGACGAAAGTCCTCATAACCCGGAAATAACTGCTCAGAAGTCAGAATCTACCCTGGTGGCTGAACAAGGATCAGTTTGTGGAGGATTGTGTGCCACTCCTCACAAAAGATTGAGGGACATTGTTTACAGGAGTATACAAACTGTAGTTTTCTCAAACAAACTCAACTTGCTTATGCCTTTTGGACCACTGGCAATTCTTGTAGAAAAATTGACTAATCATCATGGTTGGGTCTTCATTCTGAGTTTATTGGGTATAATGCCTCTGGCTGAGCGGTTAGGTTATGCTACAGAGCAGCTGGCGTTTTACTCCGGAGATACTGTTGGAGGTCTTCTAAATGCTACTTTTGGAAACGCAACAGAACTGATCATCTCAATATATGCTTTGAAAAGTGGAATGACACGAGTTGTACAGCTCTCTTTGCTTGGATCAATTTTGTCAAATATGTTGCTGGTGCTTGGATGTGCATTCTTAAGTGGTGGGATCGTTTTCCAAAAGAAGGAGCAGGTTTTTAACAAGGCAACTGCTACTGTGAACTCAGGATTGTTGTTGATGGCAGTCATGGGCCTACTTTTTCCTGCTGTTCTTCACTACACACACACCGAGGTGCATTTTGGGAAGTCAGAACTGGCTCTTTCAAGATTCAGCAGCTGCATCATGCTTGTGGCATATGCTGCATACCTATTTTTCCAGTTAAAGAGTCAAAAAAATCTCTATGTCTCTCTGAATGAGGAAGAAGATCAGATTGAAAACAGCTCAAATGATGAAGAATCTCCAGATATCTCTAAATGGGAATCATTAATCTGGCTTTCAATTATGACTGCTTGGATATCAATTCTATCAGAATATTTGGTTGGTGCTATAGAGGGAGCATCTACTGCATGGAAAATGCCGGTTACCTTTATTAGTGTCATACTGCTTCCACTAGTGGGAAATGCTGCAGAGCATGCCAGTGCTATCATGTTTGCCATGAAAGATAAGCTTGATATTTCCCTAGGAGTAGCAATAGGATCATCTACACAAATATCTATGTTTGTGATACCATTTTGTGTGGTTATTGGCTGGATAACGGGGCAACCTTTGGACTTAAACTTTCGACTTTTTGAGACGGCAGCACTGTTTCTGACTGTTATTGTTGTAGCCTTCTTGTTGCAGGAAGGAACTTCTAATTACTTCAAAGGACTTATGCTTATTCTTTGCTATCTCATAGTGGCTGCTAGTTTTTTTGTACACCTAGATTCCGCTTCAGTAGGAATTGAAGAAATGGGTGAGGAAGTATTACATCAAATTTCCCTTGATTGTAAGCTTTTCTTATTGAAAGCTTTTCTTCCTGCAATGTACATTCCAGAAGAACCTCTTAATAGAACAGTATGGCAAAATTCCCAGAAAACGACGTCTGATTCCTCCATTATTGGGTCTTCAATGCCTGCTCATAATTCAAGCCCTGCCCTAGTCGACGCGGAAAACAAACTAATATTGAACCCAAGACCATTAGCATTGGGTCAAATTCAGAGGGCTTCGCCTGATCTTCCTTCTCCTGCGTCAGGGATTCACAGGAATTGA 1815 0.4105 MSSEQSQYDQTGLSNVNFWKCVQKRTAIPARRLYEFVFCKVFSGDAEVPAALYYFVLISESNLLDELSERCKMNSPNERPIREFEDESPHNPEITAQKSESTLVAEQGSVCGGLCATPHKRLRDIVYRSIQTVVFSNKLNLLMPFGPLAILVEKLTNHHGWVFILSLLGIMPLAERLGYATEQLAFYSGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLSGGIVFQKKEQVFNKATATVNSGLLLMAVMGLLFPAVLHYTHTEVHFGKSELALSRFSSCIMLVAYAAYLFFQLKSQKNLYVSLNEEEDQIENSSNDEESPDISKWESLIWLSIMTAWISILSEYLVGAIEGASTAWKMPVTFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWITGQPLDLNFRLFETAALFLTVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHLDSASVGIEEMGEEVLHQISLDCKLFLLKAFLPAMYIPEEPLNRTVWQNSQKTTSDSSIIGSSMPAHNSSPALVDAENKLILNPRPLALGQIQRASPDLPSPASGIHRN 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0255 604 NCBIfam calcium/proton exchanger 128 493 - -
Glsi08g0255 604 Coils Coil 316 336 - -
Glsi08g0255 604 FunFam Vacuolar cation/proton exchanger 190 329 - -
Glsi08g0255 604 NCBIfam calcium/proton exchanger 143 493 IPR004798 GO:0006816|GO:0015369
Glsi08g0255 604 FunFam Vacuolar cation/proton exchanger 338 494 - -
Glsi08g0255 604 Gene3D - 188 333 IPR044880 -
Glsi08g0255 604 Gene3D - 335 494 IPR044880 -
Glsi08g0255 604 Pfam Sodium/calcium exchanger protein 351 490 IPR004837 GO:0016020|GO:0055085
Glsi08g0255 604 Pfam Sodium/calcium exchanger protein 161 316 IPR004837 GO:0016020|GO:0055085
Glsi08g0255 604 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 102 496 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0255 Glsi-ChrGlsi08 2407677 2424279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0255 81 497 Antiporters AT1G55730 71.703 0.0 608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0255 08 2407677 2424279 Glsi08g0255 08 2407677 2424279 ECH