Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0247 ATGTGCAGGAAGTGGATCGGAGCAAGATTCTTCAGCAAGGGTTACGAGTCAAAGTTTGGCAAACTTAACGCATCACTTTACACAGCTCGAGACGATCAAGGCCATGGCTCCCCTACTTTATCAATTGCTGGGGGTAGTTTTGTTCCAGGAGCAAATGTTTTTGGCTTTGGCAATGTCACTGCCAAGGGTGAATCCCCCAAAGCCCGAGTTGAAGCATACAAGGCTAGGTTACTTACTAGTTGCTTTAAGTTTGAATTGTGCTTCACAATTCATATATGCTTTTGCTTTAAACCAGATGAAAATTACAGAATGCACTCATTGTTTTATTTCAATTTGAACTTCCACGGAGCTAGTGTTTCTACAGACTTACCATTTGAGAAGTTCTATCCACTAATCAGTTCTGTAGATGCTAAAGCTGCTAATGCCACAATTAAGAAAGCCCATTGCAAGTCTTACATTGTATACTTAGGATCACACTCTCATGGCCCAAACCCTTCCGCGACTGATCAAGAATATGCTACAAATTCACATTATAAGTTACTAGGATCACACTTGGGAAGCCATGAGAAGGCCAAGGAAGCAATATTTTACTCATATAATAAACACATCAATGGTTTTGCTGCGGTTCTTGAAGATGAAGAAGCAGCAGATATTGCAAAGAATCCAAATGTAGTGTCTGTGTTTCTGAACGAAGGGCACGAGCTGCAAACCACAAGGTCATGGGAATTTCTGGGACTAGAGAGCAATGGAGTAGTTCCTAAAGACTCAACTTGGGAGAAGGCAAGATATGGTGAAGATACTATCATTGCTAACATTGATACTGGTGTTTGGCCTGAATCCAAAAGCTTTAGCGACGAAGGAATGGGCCCTATTCCCTCAAGGTGGCGTGGGATCTGTCAACTAGACAATTTTCGTTGCAATAGAAAGTTGATTGGAGCACGATTCTTCAGCAAGGGTTATGAGTCAAAGTTTGGCAAACTTAACACATCGCTTTACACAGCACGTGACAATCAGTTAGGGCATGGCACCCCTACTCTATCAATTGCTGGCGGTAGTTTTGTTCCAGGAGCAAGTGTCTTTGGTTTTGGCAATGGCACTGCCAAAGGTGGATCCCCTAAAGCCCGTGTTGCAGCATACAAAGTGTGCTGGCTTTCAATCATTGAGACGATCGAATGCACTGATGCAGATGTCATGGAGGCTTTTGAGGCTGCCATAAGTGATGGGGTTGATGTGATTTCGTTTTCCCTGGGGAAGCCTATTCCCCCCGACTTTTTTGAGGATGGGTTTTCCATAGGGGCCTTCCATGCAATAGCCAATGGTGTGATGGTTGTTGGTGGTGCAGGGAATGAAGGACCTAGTCCTGGAACTGTAACTAATGTGGCACCATGGATGTTTACCGTTGCCGCCAGCACCATAGACAGAGACTTTGCCAGTTATATTGCACTTGGTGATAAGAAGCACTTAATGGGAGCTAGTCTTTCGACAGGCTTACCATCTAAGAAGTTCTATCCGCTGGTCAGTTCTGTAGATGCTAAAGCTACTAATGCCACAATTGAAAATGCTCAACATTGCAAAAGTGGAACTCTTGATCCTAAGAAAGTAAAGGGTAAAATTCTCATTTGCCAAGTAAGCGAGCTGGCAGGAATAGCTTACGCAGAGCAAGAAGCTCTTCTTGCAGGCGCAGTAGGACTGATTTTGGCAAATAATGAGAAACTTGGGAATGATATAATGGCTGATGTTCATTTTCTGCCTACTTCACACATCAATTTCACAGATGGTGAAGATGTTTATTCCTACATAAAACTCACCAAGGCCCCCATGGCTTATATGACAAGAGCAAAAACACAAGTAGGAATAAAATCAGCTCCAGTAATGGCTTCATTCTCATCTAGGGGACCTAGTATCATTCAGCCAGCAATCCTCAAGCCTGATATCACTGCACCAGGAGTGGACATTCTTTGTGCATACCCAGAAGGCCTAAATCCAAGTGGTATTGATTTAGATAAACGCAGGATCCCATTTAGTATAGGTTCTGGAACCTCCGAGTCATGCCCTCATGTTGCGGGCATCGTAGGCCTTCTCAAAACAGCTTATCCTCATTGGAGTCCTGCAGCTATTAGATCTGCAATCATGACAACCGGAAAAATGGTGGGCTCCTCCATATTTCAGCTTCTTCTATCAGCTTTTCTTCTGTGCTCTTTCAGGCTCCAACATAGCCATGCCATGAAAAATTCCTACATTGTATATTTAGGAGCACATTCTCATGGCCCAAACCCTTCACTTCTTGATCTTGAGTCAGCCACAGATTCCCATTACTATTTACTGGCATCACTCTTGGGAAGCCATGAGAAGGCACAGGAAGCAATATTTTACTCATATAATAGAAACATAAATGGCTTTGCTGCAGTGCTGGAAGAGGAAGAAGCAGCAGAAATTGCAAAGAATCCAAATGTAGTGTCTGTTTTCTTGAACAGAAGGCATAAACTGCACACTACTCGGTCATGGGAATTTCTTGGACTAGAGAGAAAAGGAGTAGCTCTGAAAAATTCCACTTGGGAGAAGGCAAAATATGGTCAAGATACCATCATTGCTAACCTTGATACAGGTGTTTGGCCTGAATCCAAGAGCTTTAGCAGCGAAGGAATGGGACCTGTCCCTTCAAAGTGGCGAGGCAATGGCACATGCCAAATTGACAATTTTCATCATTCAAATAAAACTCTCTGCAATAGGAAGCTGATAGGAGCAAGATTCTTCCTGAAAGGCTATGAGGCTTATGCAGGCAAACTCAGTGCGTCATTCTACACAGCGCGGGACACTGAAGGCCATGGCTCCCATACTCTATCAACTGCTGGTGGTAACTTTGTTCCAGGGGCAAGTGTCCTTGGCAATGGCAAAGGCACTGCGAAGGGTGGCTCTCCAAGGGCAAGGGTCGCAGCCTACAAGGTGTGCTGGCCCCCAGTCAATAGCACAGACAGTGGAGGCTGCTTTGATGCGGATATCTTAGCTGGTTTTGAGGCTGCCATTAGTGATGGAGTTGATGTGATCTCGGCTTCCATTGGTGGGGAACCCTCAGACATGATTTTAGATTCCATTGCCATAGGGTCCTTCCATGCTGTTTCCAATGGAATAGTGGTGGTTAGCTCTGCTGGGAACGAAGGACCTACCCCAGGAAGTGTGTCCAACGTCTCTCCATGGATGCTCACTGTTGCCGCTAGCACTCTAGACAGGGAGTTCTCCAACTATGTTGCACTTGGCGACAAGAAGCATCTAAAGGGAGCTAGTCTTTCATCTATGGGCTTGCCATCTCAGAAGTTCTATCCTTTAATTAGTGCTGAGGATGCTAAACTTCCTGAAGCGCCATCCCAATTGGCTAAACTCTGCTATAATGGGACCCTTGATCCTAACAAGGTGAAGGGAAAGATATTGGTGTGCCTTAGAGGAGAGATTGCAAGAACTCAAAAAGGCGAAGCAGCTTCTCTTGCAGGAGCAGTAGGAATGGTTTTGGCCAATGATGCCTTAAGCTTGGATGACACTATGGCAGACCCTCATGTTTTGCCTGCCTCAAATATCAATTATGAAGATGGTGAATATGTTTATTCCTACCTCAAACGTAGCAAGAACCCTATGGCTTACATGACTAGAGCAAAAACAATAGTGCCAACAAAACCTGCTCCAGTTATGGCTGCATTCTCATCCAGAGGACCTAATACCATACTGCCTTCAATTCTCAAGCCTGACATCACTGCACCTGGAGTAAACGTAGTTGCTGCATACACAGAAGCCAAAAGTCCAACAGAACTAGACTCAGACAAACGTAGGATTCCTTTTGATTTAATGTCAGGAACTTCAATGTCATGTCCCCATGTCTCCGGCATTGTTGGCCTTCTCAAAACACTCCATCCTGATTGGAGTCCAGCAGCTATCAAATCTGCAATCATGACCACCGCAACCACTTTAGACAGCAGCAAAAGATCAATTCTGGACTCATCTCTGCAAGGAGCAACCCCATTTGCTTATGGTGCTGGGCATGTTCAACCTGAGCTTGCTATGGACCCTGGACTTGTTTATGATCTGAGCATTTCTGATTACTTGAACCTCCTATGCAGCTATGGCTACAACGAAACACAGCTTAGCTTGTTCTCTAAAGAGCCCTACACTTGTCCAAAGTCATACAGTGTGACAGATTTCAACTACCCCTCAATCACAGTGCCTATTTTGGGGTTAAACCCAGTAAAAATTACTAGGACAGTGACAAATGTGGGGCCTCCAAGCACTTACTTTGTGGATGCTAAGGTACCAAAAGGACTTCTGGTTTTTGTTGAGCCTAATTACTTGAGCTTTAAGAAAGTTGGGGAGAAGAAGAGCTTCCAGATTCTTTTGGAGGCCACTGGTATGCATAACCCTGCTAATTATTCATTTGGGGAGTTATGGTGGACAAATGGCAAGAACAAGGTGACAAGTCCTATTGTTGTCCACCACCAGAAACAGGTTTTGGAATTCGATCCGTGGAGAGTGGAATCGTTGTCTCCGCCGCACCGCCGCTCGTCCCATCTCAGACCTCTGCCTCCGACGAACGCGCGGCTCCGATTTAGGGGAAGCCCTTACCGAGATTATAAATCAACTTTTATCTCGGGTAGCACTTGGAACAATTGCATAATGCAGTCCAACGAGGCATCTTCTTCCATGGAAGTTGAAACTGTCCCATCTGAACCCAGAGTTTTACCACCAAAGCCAAAGTTTGAGCCTTTGAAAGCTCATGAGATGTCTGATGGTCGAGTTCAATTCCGCAAGGTTTCTGTTCCACAACATCGGTATACCCCTCTCAAGAAAGCTTGGATGGATATCTATACTCCGGTATATGAACAAATGAAAATTGACGTCCGTATGAATTTAAAGGCTCGGAAGGTTGAGTTGAAGACAAGGCAAGATACACCTGATATTAGTAACCTGCAAAAGTGTGCTGATTTTGTCCATGCTTTCATGCTGGGATTCGATGTCATAGATGCCGTTGCTCTTCTTCGTTTAGATGAGCTCTATGTTGAATCCTTTGAGATAAAGGATGTTAAAACACTTCGAGGGGACCACTTGTCTCGTGCTATAGGAAGATTATCTGGTAAAGGTGGTAAAACAAAGTTTGCAATTGAGAATGCAACGAAGACTAGGATTGTGATTGCTGATACCAAAATTCACATATTGGGATCTTTTGCCAACATTAAGGTTGCTAGGGATTCTCTTTGTAGTCTAATCTTGGGTTCACCGGCAGGCAAGGTGTATTCAAAACTAAGAGCAGTTACTGCTAGATTGGCAGAAAGGTTTTGA 5319 0.4439 MCRKWIGARFFSKGYESKFGKLNASLYTARDDQGHGSPTLSIAGGSFVPGANVFGFGNVTAKGESPKARVEAYKARLLTSCFKFELCFTIHICFCFKPDENYRMHSLFYFNLNFHGASVSTDLPFEKFYPLISSVDAKAANATIKKAHCKSYIVYLGSHSHGPNPSATDQEYATNSHYKLLGSHLGSHEKAKEAIFYSYNKHINGFAAVLEDEEAADIAKNPNVVSVFLNEGHELQTTRSWEFLGLESNGVVPKDSTWEKARYGEDTIIANIDTGVWPESKSFSDEGMGPIPSRWRGICQLDNFRCNRKLIGARFFSKGYESKFGKLNTSLYTARDNQLGHGTPTLSIAGGSFVPGASVFGFGNGTAKGGSPKARVAAYKVCWLSIIETIECTDADVMEAFEAAISDGVDVISFSLGKPIPPDFFEDGFSIGAFHAIANGVMVVGGAGNEGPSPGTVTNVAPWMFTVAASTIDRDFASYIALGDKKHLMGASLSTGLPSKKFYPLVSSVDAKATNATIENAQHCKSGTLDPKKVKGKILICQVSELAGIAYAEQEALLAGAVGLILANNEKLGNDIMADVHFLPTSHINFTDGEDVYSYIKLTKAPMAYMTRAKTQVGIKSAPVMASFSSRGPSIIQPAILKPDITAPGVDILCAYPEGLNPSGIDLDKRRIPFSIGSGTSESCPHVAGIVGLLKTAYPHWSPAAIRSAIMTTGKMVGSSIFQLLLSAFLLCSFRLQHSHAMKNSYIVYLGAHSHGPNPSLLDLESATDSHYYLLASLLGSHEKAQEAIFYSYNRNINGFAAVLEEEEAAEIAKNPNVVSVFLNRRHKLHTTRSWEFLGLERKGVALKNSTWEKAKYGQDTIIANLDTGVWPESKSFSSEGMGPVPSKWRGNGTCQIDNFHHSNKTLCNRKLIGARFFLKGYEAYAGKLSASFYTARDTEGHGSHTLSTAGGNFVPGASVLGNGKGTAKGGSPRARVAAYKVCWPPVNSTDSGGCFDADILAGFEAAISDGVDVISASIGGEPSDMILDSIAIGSFHAVSNGIVVVSSAGNEGPTPGSVSNVSPWMLTVAASTLDREFSNYVALGDKKHLKGASLSSMGLPSQKFYPLISAEDAKLPEAPSQLAKLCYNGTLDPNKVKGKILVCLRGEIARTQKGEAASLAGAVGMVLANDALSLDDTMADPHVLPASNINYEDGEYVYSYLKRSKNPMAYMTRAKTIVPTKPAPVMAAFSSRGPNTILPSILKPDITAPGVNVVAAYTEAKSPTELDSDKRRIPFDLMSGTSMSCPHVSGIVGLLKTLHPDWSPAAIKSAIMTTATTLDSSKRSILDSSLQGATPFAYGAGHVQPELAMDPGLVYDLSISDYLNLLCSYGYNETQLSLFSKEPYTCPKSYSVTDFNYPSITVPILGLNPVKITRTVTNVGPPSTYFVDAKVPKGLLVFVEPNYLSFKKVGEKKSFQILLEATGMHNPANYSFGELWWTNGKNKVTSPIVVHHQKQVLEFDPWRVESLSPPHRRSSHLRPLPPTNARLRFRGSPYRDYKSTFISGSTWNNCIMQSNEASSSMEVETVPSEPRVLPPKPKFEPLKAHEMSDGRVQFRKVSVPQHRYTPLKKAWMDIYTPVYEQMKIDVRMNLKARKVELKTRQDTPDISNLQKCADFVHAFMLGFDVIDAVALLRLDELYVESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENATKTRIVIADTKIHILGSFANIKVARDSLCSLILGSPAGKVYSKLRAVTARLAERF 1772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0247 1772 Gene3D Peptidase S8/S53 domain 266 717 IPR036852 GO:0004252|GO:0006508
Glsi08g0247 1772 FunFam subtilisin-like protease SBT1.5 1075 1219 - -
Glsi08g0247 1772 FunFam Subtilisin-like protease SBT1.5 860 1088 - -
Glsi08g0247 1772 SMART kh_6 1677 1750 IPR004087 GO:0003676
Glsi08g0247 1772 FunFam Subtilisin-like protease SBT5.3 734 830 - -
Glsi08g0247 1772 Pfam PA domain 1125 1196 IPR003137 -
Glsi08g0247 1772 Pfam PA domain 521 595 IPR003137 -
Glsi08g0247 1772 FunFam subtilisin-like protease SBT1.5 473 617 - -
Glsi08g0247 1772 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 1677 1771 IPR036612 GO:0003723
Glsi08g0247 1772 FunFam Subtilisin-like protease SBT5.3 140 236 - -
Glsi08g0247 1772 CDD KH-I_PNO1_rpt1 1593 1672 - -
Glsi08g0247 1772 CDD KH-I_PNO1_rpt2 1674 1769 - -
Glsi08g0247 1772 Gene3D - 473 617 - -
Glsi08g0247 1772 Gene3D - 1075 1219 - -
Glsi08g0247 1772 SUPERFAMILY Subtilisin-like 829 1354 IPR036852 GO:0004252|GO:0006508
Glsi08g0247 1772 Pfam Peptidase inhibitor I9 745 830 IPR010259 -
Glsi08g0247 1772 Pfam Peptidase inhibitor I9 151 232 IPR010259 -
Glsi08g0247 1772 SUPERFAMILY Subtilisin-like 236 717 IPR036852 GO:0004252|GO:0006508
Glsi08g0247 1772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 747 1491 IPR045051 -
Glsi08g0247 1772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 732 830 IPR037045 -
Glsi08g0247 1772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 134 236 IPR037045 -
Glsi08g0247 1772 Gene3D Peptidase S8/S53 domain 860 1363 IPR036852 GO:0004252|GO:0006508
Glsi08g0247 1772 CDD PA_subtilisin_like 479 608 - -
Glsi08g0247 1772 Gene3D Peptidase S8/S53 domain 1 84 IPR036852 GO:0004252|GO:0006508
Glsi08g0247 1772 Pfam Fibronectin type-III domain 1395 1491 IPR041469 -
Glsi08g0247 1772 Gene3D K Homology domain, type 1 1676 1772 IPR036612 GO:0003723
Glsi08g0247 1772 CDD Peptidases_S8_3 827 1317 IPR034197 -
Glsi08g0247 1772 ProSiteProfiles Serine proteases, subtilase domain profile. 834 1350 - -
Glsi08g0247 1772 Pfam Subtilase family 264 714 IPR000209 GO:0006508|GO:0008236
Glsi08g0247 1772 CDD Peptidases_S8_3 233 713 IPR034197 -
Glsi08g0247 1772 FunFam Subtilisin-like protease SBT1.5 1367 1494 - -
Glsi08g0247 1772 CDD PA_subtilisin_like 1081 1210 - -
Glsi08g0247 1772 Gene3D - 1367 1494 - -
Glsi08g0247 1772 Pfam Subtilase family 858 1328 IPR000209 GO:0006508|GO:0008236
Glsi08g0247 1772 ProSitePatterns Serine proteases, subtilase family, serine active site. 1281 1291 IPR023828 -
Glsi08g0247 1772 ProSitePatterns Serine proteases, subtilase family, serine active site. 679 689 IPR023828 -
Glsi08g0247 1772 PRINTS Subtilisin serine protease family (S8) signature 1280 1296 IPR015500 -
Glsi08g0247 1772 PRINTS Subtilisin serine protease family (S8) signature 938 951 IPR015500 -
Glsi08g0247 1772 PRINTS Subtilisin serine protease family (S8) signature 858 877 IPR015500 -
Glsi08g0247 1772 FunFam RNA-binding protein PNO1 1676 1772 - -
Glsi08g0247 1772 SUPERFAMILY PA domain 1134 1205 IPR046450 -
Glsi08g0247 1772 ProSiteProfiles Serine proteases, subtilase domain profile. 240 768 - -
Glsi08g0247 1772 FunFam Subtilisin-like protease SBT1.5 266 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0247 Glsi-ChrGlsi08 2324707 2351525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0247 3 74 Subtilisin-like Serine Gene Family AT5G59810 67.123 1.12e-18 90.9