Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0237 ATGATTATGATTTCCCGATCGAATCCGGAGTTTGAAGCTCTTTGTCGTCTGTTTGAATCTTTTCTCCTTTTGGATCTGGTTCTGGTTGTGGATATTATTGCCCTTCAACTAGTTTGGTCTTTGCCGATGGATAATAAGTCTGTTGTAGATTTAATGGAGTCATCCTCTGAGGTTCATTTTTCTGGATTTCACATGGATGGTTTAGCACAAAGAAATGCTGGCACAGAGCAGCCAACAACTTCAGCAACTGACATGTACGGACAACCCTTTGTCATAGGTGTTGCTGGGGGAGCTGCATCTGGGAAGACTACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAAAGAGTTGTACTTGTTAATCAGGATTCTTTTTATCATAATTTGACTGAAGAGGAACTTACAAGAGTACAGGATTACAACTTTGACCATCCTGATGCTTTTGATACCGAGCAATTGTTACGTGTTATGGACAAGTTAAAGCATGGCCAAGCTGTAGATATTTCAAAATATGACTTCAAGAGTTACAAGAGTGATGTATTTCCAGCAAGAAGGGTGAATCCTTCGGATGTTATAATTTTGGAAGGCATTCTTATCTTCCATGATCCACGTGTTCGAGAGTTAATGAATATGAAGATATTTGTTGACACAGACGCTGATGTTCGTCTGGCTAGGAGAATTAGGCGTGATACTGGTGAGAAGTCTCGGGATATTGGCTTAGTGCTTGATCAGTATTCTAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCTGATATCATTATCCCTCGGGGAGGAGATAATCATGTGGCCATTGATTTGATTGTACAGCATATACGCACAAAGCTTGGTCAGCATGATCTGTGTAAAATATATCCTAATTTATATGTCATCCAATCAACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAGACAACGAAGCATGATTTTGTATTTTATGCTGACCGTTTGATTCGTTTGGTTGTAGAACATGGTCTGGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCGACTGGGTCTGTATATACTGGTGTGGATTTTTGCAAGAGGTTATGTGGTGTCTCTGTTATCAGGAGTGGGGAGAGTATGGAGAATGCTTTACGTGCATGCTGTAAAGGTATCAAGATTGGGAAAATTCTTATTCATAGGGAAGGTGACAATGGTCAGCAGCTAATATATGAAAAGTTGCCTAGTGATATCTCAGATAGGCATGTGTTACTATTGGATCCTATTCTAGGCACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTTTAAGGAAGGGTGTACCAGAGTGCAACATTATATTTCTCAATCTCATATCAGCACCTCAAGGTGTGCATGTGGTCTGCAAAAGTTTTCCAAGAATAAAAATAGTGACATCTGAGATTGATATCGGTTTGAATGAAGATTTTCGCGTCATACCTGGCATGGGTGAGTTTGGGGACCGTTACTTTGGAACAGATGATGACGACGACAACCAACAGGTGGTGGCCCCTTCAAAGTAG 1569 0.4028 MIMISRSNPEFEALCRLFESFLLLDLVLVVDIIALQLVWSLPMDNKSVVDLMESSSEVHFSGFHMDGLAQRNAGTEQPTTSATDMYGQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELTRVQDYNFDHPDAFDTEQLLRVMDKLKHGQAVDISKYDFKSYKSDVFPARRVNPSDVIILEGILIFHDPRVRELMNMKIFVDTDADVRLARRIRRDTGEKSRDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPSDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPECNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDDNQQVVAPSK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0237 522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 282 IPR027417 -
Glsi08g0237 522 PRINTS Uridine kinase signature 89 106 - -
Glsi08g0237 522 PRINTS Uridine kinase signature 119 130 - -
Glsi08g0237 522 PRINTS Uridine kinase signature 164 179 - -
Glsi08g0237 522 PRINTS Uridine kinase signature 221 231 - -
Glsi08g0237 522 PRINTS Uridine kinase signature 235 246 - -
Glsi08g0237 522 PRINTS Uridine kinase signature 257 270 - -
Glsi08g0237 522 SUPERFAMILY PRTase-like 292 509 IPR029057 -
Glsi08g0237 522 NCBIfam uridine kinase 90 289 IPR000764 -
Glsi08g0237 522 CDD PRTases_typeI 366 481 IPR000836 -
Glsi08g0237 522 Pfam Uracil phosphoribosyltransferase 307 508 - -
Glsi08g0237 522 CDD UMPK 91 289 IPR000764 -
Glsi08g0237 522 Gene3D - 87 292 IPR027417 -
Glsi08g0237 522 Pfam Phosphoribulokinase / Uridine kinase family 91 277 IPR006083 GO:0005524|GO:0016301
Glsi08g0237 522 Gene3D - 293 508 IPR029057 -
Glsi08g0237 522 FunFam Uridine kinase 293 508 - -
Glsi08g0237 522 PANTHER URIDINE KINASE 79 419 - -
Glsi08g0237 522 FunFam Uridine kinase 86 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0237 Glsi-ChrGlsi08 2066284 2073869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0237 43 511 PRT Gene Family AT4G26510 84.501 0.0 818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0237 08 2066284 2073869 Glsi10g1874 10 13083096 13092836 CCT