Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0231 ATGAGACTTTCTTTCTTCTCTTCTCATATCCCCCATTGCTCTCCCATTAAATTTCACCATTCTTCCCTCATTCTTTCCCCTCCAACGCCTTCTTCCCGCAGACCCCGCTGGCTACGAATGGACGCCACCTCCGCCTACCACCGCCACCACAGGAAGGACAAGGTGGTTATCATCTTGGGCGCCACCGGGACCGGAAAGTCTCGCCTTTCCGTTGAGCTCGCCACCCGTTTTGGCTCTTCGGAAATCATCAATTCAGACAAAATGCAGGTCTACAGAGGTCTCGACATCACCACCAACAAGATCCCCATCGACGAACGGAACGGCGTCCCCCACCATCTTCTCGGAGAGGTCGACCCGATGAACGGAGAGTTTTCCCCGTCGGATTTTCGGTTGAGTGGGGGCTCTGTTATATCGGATATCTGTTCAAGGAGGAAGCTTCCAATCGTCGTTGGTGGGTCCAACTCGTTCGTACATGCTCTTCTGGTGGACCGATTCGATCCTGAGTTGAATGTGTTTGATGGGTCATCGTCGATCTCGTCCGAGTTGAGGTACAAGTGCTGCTTCCTCTGGGTGGACGTCTCGTTCCCTGTGTTATTGGAATACTTATGGAAGCGAGTCGACGACATGCTCGACTCAGGAATGAACGAGTTGGCTGAGTTCTTCAACCCGGAAGCGGGCGACTTGGGCGATGACTCTGCCCACCGGACTGGGTTGAGGAAAACCATCGGCGTACCCGAGTTCGACCGGTATTTCAAGAAATACCCACCACCGGGTGGGCTCAGGCTGGGAGGAGATGATCAGCTGCGGAAGGCTGCATGCGAGGAGGCAGTGAAGGCGATAAAGGACAACACGTGTCAACTAGTGAAAAGGCAGATAGCAAAGATCTTGCGGCTAAAAGGGGCAGGGTGGGACCTACAGAGGGTGGATGCAACGGAAGCAATTCGGGAGGCGATGACGTCAGGATGTTCCGGCGACGGCGGCGAAGAGAGGTGGTCAGATATTTGGGAGAGACAGGTGGCGGAACCAAGCGTGAAGATTGTGAAGCGATTCGTGAAGGAGTAG 1062 0.5433 MRLSFFSSHIPHCSPIKFHHSSLILSPPTPSSRRPRWLRMDATSAYHRHHRKDKVVIILGATGTGKSRLSVELATRFGSSEIINSDKMQVYRGLDITTNKIPIDERNGVPHHLLGEVDPMNGEFSPSDFRLSGGSVISDICSRRKLPIVVGGSNSFVHALLVDRFDPELNVFDGSSSISSELRYKCCFLWVDVSFPVLLEYLWKRVDDMLDSGMNELAEFFNPEAGDLGDDSAHRTGLRKTIGVPEFDRYFKKYPPPGGLRLGGDDQLRKAACEEAVKAIKDNTCQLVKRQIAKILRLKGAGWDLQRVDATEAIREAMTSGCSGDGGEERWSDIWERQVAEPSVKIVKRFVKE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0231 353 Gene3D - 52 351 IPR027417 -
Glsi08g0231 353 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 195 305 - -
Glsi08g0231 353 Pfam IPP transferase 182 292 - -
Glsi08g0231 353 Pfam IPP transferase 89 165 - -
Glsi08g0231 353 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 52 350 IPR039657 -
Glsi08g0231 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 221 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0231 Glsi-ChrGlsi08 2024511 2025572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0231 183 352 C2H2 Transcription Factor Family AT2G27760 28.125 2.21e-11 62.8